RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 H3BMM0 161 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 SERF1AO75920 110 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 CKS2P33552 79 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 TDRG1Q3Y452 100 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 C9orf66Q5T8R8 295 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 GFI1BQ5VTD9 330 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 STHQ8IWL8 128 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 SYT8Q8NBV8 401 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 C12orf57Q99622 126 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 MAP6D1Q9H9H5 199 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 SELENOKQ9Y6D0 94 aa7.62□□□□□ -1.19
HDAC3-210ENST00000490808 IGHV1OR15-1A0A075B7D0 117 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 H3BVH4 76 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 ZNF324O75467 553 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-210ENST00000490808 PPP1R17O96001 155 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 CD7P09564 240 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 PRR9Q5T870 116 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 TMEM256Q8N2U0 113 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 PRELID3AQ96N28 172 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 C11orf21Q9P2W6 132 aa7.61□□□□□ -1.19
HDAC3-210ENST00000490808 IGKV3-20P01619 116 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 IGLV1-51P01701 117 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 LINC00614P0C842 121 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 AMTP48728 403 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 DEFB1P60022 68 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 SSTP61278 116 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 MUC21Q5SSG8 566 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 RNASEKQ6P5S7 137 aaKnown RBP7.6□□□□□ -1.19
HDAC3-210ENST00000490808 FA2HQ7L5A8 372 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 NIT1Q86X76 327 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 MRAP2Q96G30 205 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 ZNF256Q9Y2P7 627 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-210ENST00000490808 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-210ENST00000490808 U3KQK5 164 aa7.6□□□□□ -1.19
HDAC3-210ENST00000490808 KNCNA6PVL3 124 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 D6R8Y8 96 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 INSP01308 110 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-210ENST00000490808 IQCJQ1A5X6 159 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 MRPL51Q4U2R6 128 aaKnown RBP7.59□□□□□ -1.19
HDAC3-210ENST00000490808 KPRPQ5T749 579 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-210ENST00000490808 SAMD5Q5TGI4 173 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 MAP1LC3AQ9H492 121 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 RYR3Q15413 4870 aa7.59□□□□□ -1.19
HDAC3-210ENST00000490808 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 IFITM10A6NMD0 228 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 M0R2Z0 102 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 GNRH2O43555 120 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 AMTNQ6UX39 209 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 OR10AG1Q8NH19 301 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 LINC00467Q9BRT7 94 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 C1QTNF4Q9BXJ3 329 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 NXT2Q9NPJ8 142 aaKnown RBP7.58□□□□□ -1.2
HDAC3-210ENST00000490808 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 TP53TG3Q9ULZ0 132 aa7.58□□□□□ -1.2
HDAC3-210ENST00000490808 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 CBY3A6NI87 242 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 M0R381 172 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 EGFEM1PQ0D2K5 195 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 ZNF575Q86XF7 245 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
HDAC3-210ENST00000490808 SCGB1D1O95968 90 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 RNASE3P12724 160 aaKnown RBP7.56□□□□□ -1.2
HDAC3-210ENST00000490808 ZNF415Q09FC8 603 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 BEAN1Q3B7T3 259 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 MORN3Q6PF18 240 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-210ENST00000490808 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 RCHY1Q96PM5 261 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 LINC01587Q99440 93 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 SPXQ9BT56 116 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 TMEM208Q9BTX3 173 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 MSRB1Q9NZV6 116 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 HSPB8Q9UJY1 196 aa7.56□□□□□ -1.2
HDAC3-210ENST00000490808 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
HDAC3-210ENST00000490808 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
HDAC3-210ENST00000490808 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 NUPR1O60356 82 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 NXPH4O95158 308 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 IGLL1P15814 213 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 EVI2AP22794 236 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 G0S2P27469 103 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 ODF3L2Q3SX64 289 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 PYY3Q5JQD4 70 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 Q8N1Y9 231 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 PTH2Q96A98 100 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 NDUFAF3Q9BU61 184 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
HDAC3-210ENST00000490808 C20orf202A1L168 122 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms