RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 PDZD11Q5EBL8 140 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 NAGKQ9UJ70 344 aa11.49□□□□□ -0.57
PCCB-218ENST00000490504 SACSQ9NZJ4 4579 aa11.48□□□□□ -0.57
PCCB-218ENST00000490504 KIR3DS1Q14943 382 aa11.48□□□□□ -0.57
PCCB-218ENST00000490504 OR10J3Q5JRS4 329 aa11.48□□□□□ -0.57
PCCB-218ENST00000490504 CASC10Q5T4H9 136 aa11.48□□□□□ -0.57
PCCB-218ENST00000490504 ZNF493Q6ZR52 646 aa11.48□□□□□ -0.57
PCCB-218ENST00000490504 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
PCCB-218ENST00000490504 STARD9Q9P2P6 4700 aa11.47□□□□□ -0.57
PCCB-218ENST00000490504 C7orf71A4D174 169 aa11.47□□□□□ -0.57
PCCB-218ENST00000490504 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
PCCB-218ENST00000490504 HLA-DRB4P13762 266 aa11.47□□□□□ -0.57
PCCB-218ENST00000490504 BAGE3Q86Y29 109 aa11.47□□□□□ -0.57
PCCB-218ENST00000490504 HLA-DRB4X5D2U9 266 aa11.47□□□□□ -0.57
PCCB-218ENST00000490504 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.57
PCCB-218ENST00000490504 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 A8MTW9 85 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 CDKN1BP46527 198 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 TWIST1Q15672 202 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 ANXA2RQ3ZCQ2 193 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 MUC21Q5SSG8 566 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 AMTNQ6UX39 209 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 ALKBH7Q9BT30 221 aaPredicted RBP11.46□□□□□ -0.57
PCCB-218ENST00000490504 TP53TG3Q9ULZ0 132 aa11.46□□□□□ -0.57
PCCB-218ENST00000490504 SNAI2O43623 268 aa11.46□□□□□ -0.58
PCCB-218ENST00000490504 OR5AL1P0C617 328 aa11.46□□□□□ -0.58
PCCB-218ENST00000490504 SSTP61278 116 aa11.46□□□□□ -0.58
PCCB-218ENST00000490504 TMEM256Q8N2U0 113 aa11.46□□□□□ -0.58
PCCB-218ENST00000490504 FAM110AQ9BQ89 295 aa11.46□□□□□ -0.58
PCCB-218ENST00000490504 H3BMM0 161 aa11.45□□□□□ -0.58
PCCB-218ENST00000490504 NTF3P20783 257 aa11.45□□□□□ -0.58
PCCB-218ENST00000490504 ASIPP42127 132 aa11.45□□□□□ -0.58
PCCB-218ENST00000490504 CACNG7P62955 275 aa11.45□□□□□ -0.58
PCCB-218ENST00000490504 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
PCCB-218ENST00000490504 RYR2Q92736 4967 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 H3BVH4 76 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 M0R2Z0 102 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 MED14OSP0DP75 135 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 ESDP10768 282 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 FABP4P15090 132 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 SPINK13Q1W4C9 94 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 C18orf32Q8TCD1 76 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 KCNS1Q96KK3 526 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 CSMD3Q7Z407 3707 aa11.44□□□□□ -0.58
PCCB-218ENST00000490504 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
PCCB-218ENST00000490504 SERF1AO75920 110 aa11.43□□□□□ -0.58
PCCB-218ENST00000490504 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
PCCB-218ENST00000490504 LINC00310P59036 64 aa11.43□□□□□ -0.58
PCCB-218ENST00000490504 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
PCCB-218ENST00000490504 TMEM18Q96B42 140 aa11.43□□□□□ -0.58
PCCB-218ENST00000490504 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
PCCB-218ENST00000490504 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 TRAV12-2A0A075B6T6 113 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 AMBPP02760 352 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 ZNF124Q15973 351 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 OR10AG1Q8NH19 301 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 NUPR1O60356 82 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 CMC4P56277 68 aaPredicted RBP11.42□□□□□ -0.58
PCCB-218ENST00000490504 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 OR10D4PQ8NGN7 298 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 PACRGQ96M98 296 aaPredicted RBP11.42□□□□□ -0.58
PCCB-218ENST00000490504 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
PCCB-218ENST00000490504 GNRH2O43555 120 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 TDRG1Q3Y452 100 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
PCCB-218ENST00000490504 SMIM6P0DI80 62 aa11.4□□□□□ -0.58
PCCB-218ENST00000490504 SMIM15Q7Z3B0 74 aa11.4□□□□□ -0.58
PCCB-218ENST00000490504 SCRT2Q9NQ03 307 aa11.4□□□□□ -0.58
PCCB-218ENST00000490504 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.58
PCCB-218ENST00000490504 RNASE3P12724 160 aaKnown RBP11.39□□□□□ -0.59
PCCB-218ENST00000490504 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
PCCB-218ENST00000490504 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
PCCB-218ENST00000490504 TENM2Q9NT68 2774 aa11.39□□□□□ -0.59
PCCB-218ENST00000490504 IGHV1OR15-1A0A075B7D0 117 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 FXYD7P58549 80 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 DNAH1Q9P2D7 4330 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 LYSTQ99698 3801 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
PCCB-218ENST00000490504 STHQ8IWL8 128 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 ORMDL3Q8N138 153 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
PCCB-218ENST00000490504 D6R8Y8 96 aa11.37□□□□□ -0.59
PCCB-218ENST00000490504 RAB4AP20338 218 aa11.37□□□□□ -0.59
PCCB-218ENST00000490504 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
PCCB-218ENST00000490504 C12orf57Q99622 126 aa11.37□□□□□ -0.59
PCCB-218ENST00000490504 PLECQ15149 4684 aaKnown RBP11.36□□□□□ -0.59
PCCB-218ENST00000490504 M0R381 172 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms