RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 GAPTQ8N292 157 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 ANKRD29Q8N6D5 301 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 OR10AC1Q8NH08 325 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 IFI27L1Q96BM0 104 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 BORCS8Q96FH0 119 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 LINC00526Q96FQ7 95 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 FMC1Q96HJ9 113 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 PRELID3AQ96N28 172 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 TRGV9Q99603 122 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 HSD17B10Q99714 261 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM133Q9H2Q1 129 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 HRASLS2Q9NWW9 162 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 TAC3Q9UHF0 121 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 PRO1854Q9UHT4 67 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 VPREB3Q9UKI3 123 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 MRPS18BQ9Y676 258 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 MUC3AQ02505 3323 aa1.4□□□□□ -2.19
HMGN1-218ENST00000490032 EP300Q09472 2414 aaPredicted RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 HELZP42694 1942 aaKnown RBP1.4□□□□□ -2.19
HMGN1-218ENST00000490032 PLXNA2O75051 1894 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 PLXNA1Q9UIW2 1896 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 BRWD1Q9NSI6 2320 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 PTPRDP23468 1912 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV12-2A0A075B6T6 113 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV8-1A0A0A6YYK1 113 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV8-6A0A0B4J262 113 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 A0A0B4J2C4 111 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 A0A1B0GUT8 65 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 TINCRA0A1B0GVN0 87 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 LOC107986453A0A1B0GWG9 222 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SMIM27A0A1W2PRY6 76 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 GRIFINA4D1Z8 144 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM14DPA8MWL7 114 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 C9JQL5 133 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 C15orf65H3BRN8 121 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 OVOL1O14753 267 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 NDUFS5O43920 106 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 COX7A2P2O60397 106 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 IGKCP01834 107 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 IGHG2P01859 326 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 HBDP02042 147 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CRYGDP07320 174 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 IGLC6P0CF74 106 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CXCL8P10145 99 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 COX6A1P12074 109 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 COX7CP15954 63 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CTLA4P16410 223 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CRYGSP22914 178 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 S100A4P26447 101 aaKnown RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CFHR2P36980 270 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SPINT3P49223 89 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 ATP5J2P56134 94 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 FXYD4P59646 89 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 PSG4Q00888 419 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 PMAIP1Q13794 54 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 KISS1Q15726 138 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF56Q15929 161 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 C12orf74Q32Q52 190 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 ETDBQ3ZM63 59 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 FAM201AQ5SY85 155 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 FAM27D1Q5T7N8 215 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 C1orf140Q5VVS0 124 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SLC48A1Q6P1K1 146 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 Q6ZS49 121 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SLC25A48Q6ZT89 311 aaKnown RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 LYZL2Q7Z4W2 148 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 FAM19A5Q7Z5A7 132 aaPredicted RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 LHFPL1Q86WI0 220 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 VKORC1L1Q8N0U8 176 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 GATD1Q8NB37 220 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 ST20-AS1Q8NBB2 130 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 C10orf105Q8TEF2 133 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 BAALCQ8WXS3 180 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 H1FXQ92522 213 aaKnown RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 APOBEC3DQ96AK3 386 aaPredicted RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 FLYWCH2Q96CP2 140 aaKnown RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SCGB3A1Q96QR1 104 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 C11orf68Q9H3H3 251 aaKnown RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 NHP2Q9NX24 153 aaKnown RBP1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CEP250Q9BV73 2442 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SCN10AQ9Y5Y9 1956 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CENPFP49454 3210 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 SORL1Q92673 2214 aa1.39□□□□□ -2.19
HMGN1-218ENST00000490032 CHD6Q8TD26 2715 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 UNC79Q9P2D8 2635 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 DOCK4Q8N1I0 1966 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 MAP1BP46821 2468 aaKnown RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 NUP210Q8TEM1 1887 aaPredicted RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV27A0A087WT01 109 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 A0A087WX48 190 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 hADV29S1A0JD25 119 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 IGLL5B9A064 214 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 H3BMM0 161 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 H3BT86 120 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 UPK2O00526 184 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 PIN1P1O15428 100 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 PLXNB1O43157 2135 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 C1orf105O95561 183 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 PPYP01298 95 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TCRAP04437 139 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms