RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 PFN1P07737 140 aaKnown RBP4.84□□□□□ -1.63
COL9A1-209ENST00000489861 GIPP09681 153 aaPredicted RBP4.84□□□□□ -1.63
COL9A1-209ENST00000489861 SEC11BP0C7V7 166 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 PPT1P50897 306 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 TDRG1Q3Y452 100 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 C5orf17Q8NAS9 161 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 HYLS1Q96M11 299 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 PRADC1Q9BSG0 188 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 TREM1Q9NP99 234 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 MRPL16Q9NX20 251 aaKnown RBP4.84□□□□□ -1.63
COL9A1-209ENST00000489861 MSRB1Q9NZV6 116 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 TNFSF18Q9UNG2 199 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 ALG5Q9Y673 324 aa4.84□□□□□ -1.63
COL9A1-209ENST00000489861 M0R2P5 195 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 TAAR5O14804 337 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 IGHV3-53P01767 116 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 TIRAPP58753 221 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 TOR2AQ5JU69 321 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 SAPCD1Q5SSQ6 148 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 LYPD5Q6UWN5 251 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 GOLT1AQ6ZVE7 132 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 Q8N814 137 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 OR4C5Q8NGB2 326 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 RASL10AQ92737 203 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 RPH3ALQ9UNE2 315 aa4.83□□□□□ -1.64
COL9A1-209ENST00000489861 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 F6UZH7 168 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 STAG3L2P0CL84 134 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 STAG3L3P0CL85 134 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 ARL14EPLP0DKL9 152 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 GYPEP15421 78 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 RAB2AP61019 212 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 FHL2Q14192 279 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 RHOHQ15669 191 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 TMEM183BQ1AE95 376 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 SMUG1Q53HV7 270 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 AKR1C8PQ5T2L2 129 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 TMEM183AQ8IXX5 376 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 NHLRC2Q8NBF2 726 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 HSD17B11Q8NBQ5 300 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 Q8TAT8 98 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 STOML3Q8TAV4 291 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 C8orf49Q96NF6 230 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 TCEAL7Q9BRU2 100 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 NAGKQ9UJ70 344 aa4.82□□□□□ -1.64
COL9A1-209ENST00000489861 A0A1W2PRE2 83 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 K7EQD1 137 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 IGLV2-8P01709 118 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 CRYGDP07320 174 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 ATP6V0CP27449 155 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 GCHFRP30047 84 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 RGS21Q2M5E4 152 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 LINC01620Q4KN68 170 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 CYB561D1Q8N8Q1 229 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 TMEM75Q8N9X5 138 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 SUN5Q8TC36 379 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 RAB24Q969Q5 203 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 CHAC1Q9BUX1 264 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
COL9A1-209ENST00000489861 FXYD6-FXYD2A0A087WZ82 144 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 CTXND1A0A1B0GTU2 59 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 TRBV6-4A0A1B0GX49 114 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 IFNA7P01567 189 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 TCRAP04437 139 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 MGST1P10620 155 aaKnown RBP4.8□□□□□ -1.64
COL9A1-209ENST00000489861 S100A4P26447 101 aaKnown RBP4.8□□□□□ -1.64
COL9A1-209ENST00000489861 RPL37AP61513 92 aaKnown RBP4.8□□□□□ -1.64
COL9A1-209ENST00000489861 EIF5AP63241 154 aaKnown RBP4.8□□□□□ -1.64
COL9A1-209ENST00000489861 FLI1Q01543 452 aaPredicted RBP4.8□□□□□ -1.64
COL9A1-209ENST00000489861 LAGE3Q14657 143 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 LINC01556Q5JQF7 62 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 PRR9Q5T870 116 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.8□□□□□ -1.64
COL9A1-209ENST00000489861 HIST1H2BAQ96A08 127 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 PTH2Q96A98 100 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 RMI2Q96E14 147 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 WFDC1Q9HC57 220 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 EPDR1Q9UM22 224 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
COL9A1-209ENST00000489861 A0A087WWC5 75 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 IGHV3-16A0A0C4DH30 117 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
COL9A1-209ENST00000489861 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
COL9A1-209ENST00000489861 SUMO1P63165 101 aaKnown RBP4.79□□□□□ -1.64
COL9A1-209ENST00000489861 OR10J3Q5JRS4 329 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 KCNIP4Q6PIL6 250 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 OR2T35Q8NGX2 323 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 ZNF479Q96JC4 524 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 URGCP-MRPS24S4R325 110 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 ARL2-SNX15V9GYD0 113 aa4.79□□□□□ -1.64
COL9A1-209ENST00000489861 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 A8MWV9 139 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 RHODO00212 210 aa4.78□□□□□ -1.64
COL9A1-209ENST00000489861 GCGP01275 180 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms