RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 DLX4Q92988 240 aaPredicted RBP8.09□□□□□ -1.11
ITSN1-231ENST00000489261 VAMP8Q9BV40 100 aa8.09□□□□□ -1.11
ITSN1-231ENST00000489261 MAP1LC3CQ9BXW4 147 aa8.09□□□□□ -1.11
ITSN1-231ENST00000489261 MSRB1Q9NZV6 116 aa8.09□□□□□ -1.11
ITSN1-231ENST00000489261 PHLDA3Q9Y5J5 127 aa8.09□□□□□ -1.11
ITSN1-231ENST00000489261 MUC21A0A0G2JKD1 596 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 MUC21A0A140T8X8 626 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 OR4C46A6NHA9 309 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 LINC00587B1AMM8 73 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 H3BVH4 76 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 CCL24O00175 119 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 NXPH4O95158 308 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 IFI27P40305 119 aaPredicted RBP8.08□□□□□ -1.12
ITSN1-231ENST00000489261 MUC21Q5SSG8 566 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 SPATA12Q7Z6I5 190 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 Q8N976 141 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 SPAG8Q99932 426 aaPredicted RBP8.08□□□□□ -1.12
ITSN1-231ENST00000489261 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
ITSN1-231ENST00000489261 KIR2DL5BA0A0G2JN68 375 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 KIR2DL5BA0A0G2JPC4 375 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 J3KRW8 73 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 TNFRSF6BO95407 300 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 CD33P20138 364 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 DEFB1P60022 68 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 DEFA6Q01524 100 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 KIR2DL5AQ8N109 375 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 Q8N8P6 123 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
ITSN1-231ENST00000489261 TRGV11A0A075B6L2 103 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 SYS1-DBNDD2H3BUS1 97 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 K7EMI3 77 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 M0R381 172 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 GNRH2O43555 120 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 NPYP01303 97 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 CD28P10747 220 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
ITSN1-231ENST00000489261 HLA-DRB4P13762 266 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 EVI2AP22794 236 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 SYT8Q8NBV8 401 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 RAX2Q96IS3 184 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 HLA-DRB4X5D2U9 266 aa8.06□□□□□ -1.12
ITSN1-231ENST00000489261 IGHV1OR15-1A0A075B7D0 117 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 LOC389332A0A1B0GUA5 103 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 H3BMM0 161 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 HBDP02042 147 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 DEFB131AP59861 70 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 PRR31Q5SQ13 230 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 AMTNQ6UX39 209 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 Q6ZQT7 251 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 TMEM61Q8N0U2 210 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 NDUFAF3Q9BU61 184 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 ZNF747Q9BV97 191 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 RNF114Q9Y508 228 aa8.05□□□□□ -1.12
ITSN1-231ENST00000489261 TRAV9-2A0A087WT02 112 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 CD7P09564 240 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 SMIM17P0DL12 118 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 FCER1GP30273 86 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
ITSN1-231ENST00000489261 MRPL52Q86TS9 123 aaKnown RBP8.04□□□□□ -1.12
ITSN1-231ENST00000489261 C9orf85Q96MD7 179 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 CITED2Q99967 270 aaPredicted RBP8.04□□□□□ -1.12
ITSN1-231ENST00000489261 MIEN1Q9BRT3 115 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 LINC00467Q9BRT7 94 aa8.04□□□□□ -1.12
ITSN1-231ENST00000489261 TIMM8BQ9Y5J9 83 aaPredicted RBP8.04□□□□□ -1.12
ITSN1-231ENST00000489261 IGHV3-16A0A0C4DH30 117 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 NCR2O95944 276 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 G0S2P27469 103 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 PROK1P58294 105 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
ITSN1-231ENST00000489261 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 PIK3CD-AS1Q5SR53 167 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
ITSN1-231ENST00000489261 NRACQ8N912 160 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 PTH2Q96A98 100 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 SELENOKQ9Y6D0 94 aa8.03□□□□□ -1.12
ITSN1-231ENST00000489261 LINC01549A6NIU2 74 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 HSBP1L1C9JCN9 74 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 SPINK13Q1W4C9 94 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 CD300EQ496F6 205 aaPredicted RBP8.02□□□□□ -1.13
ITSN1-231ENST00000489261 SPATA45Q537H7 98 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 LINC01545Q5VT33 79 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 ZNF705AQ6ZN79 300 aaPredicted RBP8.02□□□□□ -1.13
ITSN1-231ENST00000489261 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 FAM110AQ9BQ89 295 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 MAP6D1Q9H9H5 199 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 ZNF256Q9Y2P7 627 aaPredicted RBP8.02□□□□□ -1.13
ITSN1-231ENST00000489261 PAM16Q9Y3D7 125 aa8.02□□□□□ -1.13
ITSN1-231ENST00000489261 STAB1Q9NY15 2570 aa8.01□□□□□ -1.13
ITSN1-231ENST00000489261 IGLV2-18A0A075B6J9 118 aa8.01□□□□□ -1.13
ITSN1-231ENST00000489261 KNCNA6PVL3 124 aa8.01□□□□□ -1.13
ITSN1-231ENST00000489261 IGKV3-20P01619 116 aa8.01□□□□□ -1.13
ITSN1-231ENST00000489261 CTAG1AP78358 180 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms