RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 FOCADQ5VW36 1801 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 TRBV20-1A0A075B6N2 111 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 TRAV17A0A0B4J275 112 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 FAM236AA0A1B0GUQ0 79 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 FAM236BA0A1B0GV22 79 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 J3QLW9 94 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 K7ERU9 68 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 M0R129 80 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 IGF2P01344 180 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 IGHV3-30P01768 117 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 IGKCP01834 107 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 GYPBP06028 91 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 LINC00694P0DN24 101 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 IGHV3-30-5P0DP03 117 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 RHOHQ15669 191 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 CCDC58Q4VC31 144 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 LYPD5Q6UWN5 251 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 Q6ZQY7 126 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 SLC25A26Q70HW3 274 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 Q86TA4 180 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 CTAGE3PQ8IX95 158 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 ATP6V0E2Q8NHE4 81 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 PPDPFLQ8WWR9 84 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 DMAC1Q96GE9 116 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 TPT1P8Q9HAU6 139 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 MRPL36Q9P0J6 103 aaKnown RBP0.46□□□□□ -2.34
CD46-215ENST00000488596 PAIP2BQ9ULR5 123 aaKnown RBP0.46□□□□□ -2.34
CD46-215ENST00000488596 SOGA1O94964 1423 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
CD46-215ENST00000488596 MAP2P11137 1827 aaKnown RBP0.45□□□□□ -2.34
CD46-215ENST00000488596 MUC22E2RYF6 1773 aaPredicted RBP0.45□□□□□ -2.34
CD46-215ENST00000488596 LAMB1P07942 1786 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 TRAV2A0A0B4J234 112 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 TRBV10-1A0A0K0K1A3 114 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 ZNF670-ZNF695F2Z2N8 137 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 M0R2P5 195 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 NPFFO15130 113 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 FXYD4P59646 89 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 COPZ1P61923 177 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 RPS25P62851 125 aaKnown RBP0.45□□□□□ -2.34
CD46-215ENST00000488596 SPATA8Q6RVD6 105 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 ATOH7Q8N100 152 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 DYNLRB2Q8TF09 96 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 CCL19Q99731 98 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 VPS25Q9BRG1 176 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 ATG5Q9H1Y0 275 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 MRPL35Q9NZE8 188 aaKnown RBP0.45□□□□□ -2.34
CD46-215ENST00000488596 PTPRMP28827 1452 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 GRIN2AQ12879 1464 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 PARP14Q460N5 1801 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 NAV3Q8IVL0 2385 aa0.45□□□□□ -2.34
CD46-215ENST00000488596 F5P12259 2224 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 TRBV30A0A0K0K1B3 111 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 NBDYA0A0U1RRE5 68 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 LOC101927531A0A1B0GV80 90 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 HIGD1CA8MV81 97 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 NDUFA2O43678 99 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 TFF1P04155 84 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 FXYD3Q14802 87 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 XAF1Q6GPH4 301 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 ATP11AUNQ6ZP68 121 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 Q6ZS92 163 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 Q6ZUT4 128 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 VSTM2AQ8TAG5 236 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 C10orf95Q9H7T3 257 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 SAR1AQ9NR31 198 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 ERG28Q9UKR5 140 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 ANK2Q01484 3957 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 BLMP54132 1417 aaPredicted RBP0.44□□□□□ -2.34
CD46-215ENST00000488596 MYH8P13535 1937 aa0.44□□□□□ -2.34
CD46-215ENST00000488596 FRAS1Q86XX4 4008 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 PHIPQ8WWQ0 1821 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 CXorf51AA0A1B0GTR3 108 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 FXYD1O00168 92 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 APOC1P02654 83 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 CCKP06307 115 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 CAV3P56539 151 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 LINC01545Q5VT33 79 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 MIC13Q5XKP0 118 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 DEFB132Q7Z7B7 95 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 ARL11Q969Q4 196 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 PSMG3Q9BT73 122 aaPredicted RBP0.43□□□□□ -2.34
CD46-215ENST00000488596 TMEM191AQ9H0A3 160 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 JMJD1CQ15652 2540 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 PEG3Q9GZU2 1588 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 NALCNQ8IZF0 1738 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 NRXN2Q9P2S2 1712 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 NWD2Q9ULI1 1742 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 TMEM2Q9UHN6 1383 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 ARFGEF1Q9Y6D6 1849 aa0.43□□□□□ -2.34
CD46-215ENST00000488596 A0A0D9SG42 100 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 TEX49A0A1B0GTD5 131 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 TCRBV3S1A0A5B6 114 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 FAM25AB3EWG3 89 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 FAM25CB3EWG5 89 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 FAM25GB3EWG6 89 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 CCDC179H3BU77 68 aa0.42□□□□□ -2.34
CD46-215ENST00000488596 K7EIL1 84 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms