RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TRAV40A0A0B4J280 105 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 IGLV2-11P01706 119 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 IGHV3-30P01768 117 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 ACYP1P07311 99 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 IGHV3-30-5P0DP03 117 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 RPL39P5Q59GN2 51 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 SFTA2Q6UW10 78 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 ATOX1O00244 68 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 RIGQ13278 110 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 SCGB1D4Q6XE38 83 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 MRPL35Q9NZE8 188 aaKnown RBP4.89□□□□□ -1.63
SIK3-212ENST00000488337 CELSR3Q9NYQ7 3312 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 VPS13AQ96RL7 3174 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 TMEM89A2RUT3 159 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 IQCF6A8MYZ5 107 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 A8MZ25 164 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 H7C423 109 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 NTN3O00634 580 aaPredicted RBP4.89□□□□□ -1.63
SIK3-212ENST00000488337 SS18L1O75177 396 aaPredicted RBP4.89□□□□□ -1.63
SIK3-212ENST00000488337 HOXA4Q00056 320 aaPredicted RBP4.89□□□□□ -1.63
SIK3-212ENST00000488337 FMC1Q96HJ9 113 aa4.89□□□□□ -1.63
SIK3-212ENST00000488337 TRAV3A0A0B4J244 114 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 LOC389332A0A1B0GUA5 103 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 IGHV3-33P01772 117 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 PLNP26678 52 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 ORMDL3Q8N138 153 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 ZCCHC24Q8N2G6 241 aaKnown RBP4.88□□□□□ -1.63
SIK3-212ENST00000488337 TMEM263Q8WUH6 116 aaKnown RBP4.88□□□□□ -1.63
SIK3-212ENST00000488337 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 TRAV12-1A0A0B4J245 112 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 C15orf61A6NNL5 157 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 H3BT86 120 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 J3QKU1 62 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 ATP1A1-AS1Q5TC04 95 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 LEAP2Q969E1 77 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 NCBP2LA6PVI3 153 aaKnown RBP4.88□□□□□ -1.63
SIK3-212ENST00000488337 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
SIK3-212ENST00000488337 ZNRF1Q8ND25 227 aa4.88□□□□□ -1.63
SIK3-212ENST00000488337 NXT2Q9NPJ8 142 aaKnown RBP4.88□□□□□ -1.63
SIK3-212ENST00000488337 ZNF575Q86XF7 245 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 C10orf105Q8TEF2 133 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 TRAV12-2A0A075B6T6 113 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 CCL8P80075 99 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 TMEM200BQ69YZ2 307 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 FDCSPQ8NFU4 85 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 A0A0J9YY99 117 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 DCANP1Q8TF63 244 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 ZNF714Q96N38 554 aa4.87□□□□□ -1.63
SIK3-212ENST00000488337 USP9YO00507 2555 aaPredicted RBP4.87□□□□□ -1.63
SIK3-212ENST00000488337 IGHV1-2P23083 117 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 FOXC2Q99958 501 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 FRYQ5TBA9 3013 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 TRAV41A0A0B4J266 112 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 TRBV30A0A0K0K1B3 111 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 Q96MF0 132 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 C17orf77Q96MU5 243 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 AMELXQ99217 191 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 MUC3AQ02505 3323 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 M0R1B8 84 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 SPRY3O43610 288 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 LOXL3P58215 753 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 FHL2Q14192 279 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 Q86TA4 180 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 RNF185Q96GF1 192 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 PAXXQ9BUH6 204 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 LRRK2Q5S007 2527 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 USP9XQ93008 2570 aaPredicted RBP4.86□□□□□ -1.63
SIK3-212ENST00000488337 RPL18AQ02543 176 aaKnown RBP4.86□□□□□ -1.63
SIK3-212ENST00000488337 CTSZQ9UBR2 303 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 FRYLO94915 3013 aa4.86□□□□□ -1.63
SIK3-212ENST00000488337 H7C1H1 209 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 PROP1O75360 226 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 PYYP10082 97 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 C10orf113Q5VZT2 155 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 PATE2Q6UY27 113 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 C9orf139Q6ZV77 190 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 CD177Q8N6Q3 437 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 GRNP28799 593 aaKnown RBP4.85□□□□□ -1.63
SIK3-212ENST00000488337 LEPP41159 167 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 ADORA2A-AS1P86434 159 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 SLC25A29Q8N8R3 303 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 FAM110DQ8TAY7 271 aaPredicted RBP4.85□□□□□ -1.63
SIK3-212ENST00000488337 PGPA6NDG6 321 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 POLQO75417 2590 aa4.85□□□□□ -1.63
SIK3-212ENST00000488337 IGHV3-48P01763 117 aa4.84□□□□□ -1.63
SIK3-212ENST00000488337 SAA2P0DJI9 122 aaPredicted RBP4.84□□□□□ -1.63
SIK3-212ENST00000488337 CRIP1P50238 77 aa4.84□□□□□ -1.63
SIK3-212ENST00000488337 PLA2G2CQ5R387 149 aa4.84□□□□□ -1.63
SIK3-212ENST00000488337 Q6ZRU5 148 aa4.84□□□□□ -1.63
SIK3-212ENST00000488337 ANKHD1Q8IWZ3 2542 aaKnown RBP4.84□□□□□ -1.63
SIK3-212ENST00000488337 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
SIK3-212ENST00000488337 F8VRH5 84 aa4.84□□□□□ -1.63
SIK3-212ENST00000488337 BUB3O43684 328 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms