RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 LCE6AA0A183 80 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 SDC2P34741 201 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 DNAJB13P59910 316 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 MAXP61244 160 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 MRPS15P82914 257 aaKnown RBP-0.13□□□□□ -2.43
USP34-216ENST00000487547 KRTAP19-8Q3LI54 63 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 Q5BKY6 102 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 C5orf56Q8N8D9 126 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 AP3S1Q92572 193 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 PROK2Q9HC23 129 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 FKBP11Q9NYL4 201 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 COMMD3Q9UBI1 195 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 CSPG4Q6UVK1 2322 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 PTPRDP23468 1912 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 DNAH7Q8WXX0 4024 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 FGD6Q6ZV73 1430 aa-0.13□□□□□ -2.43
USP34-216ENST00000487547 HECTD4Q9Y4D8 3996 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 SVEP1Q4LDE5 3571 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 NBDYA0A0U1RRE5 68 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 TRDV1A0A1B0GX56 115 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 HIGD1CA8MV81 97 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 GABARAPH6UMI1 98 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 SAA1P0DJI8 122 aaPredicted RBP-0.14□□□□□ -2.43
USP34-216ENST00000487547 BASP1P80723 227 aaKnown RBP-0.14□□□□□ -2.43
USP34-216ENST00000487547 OR8J3Q8NGG0 315 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 TRIOO75962 3097 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 ACACAQ13085 2346 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 PDE4DIPQ5VU43 2346 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 NUP210LQ5VU65 1888 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 RELNP78509 3460 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 TRAPPC8Q9Y2L5 1435 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 FRYLO94915 3013 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 ZFHX3Q15911 3703 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 F8P00451 2351 aa-0.14□□□□□ -2.43
USP34-216ENST00000487547 SMARCA2P51531 1590 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 CSMD2Q7Z408 3487 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.15□□□□□ -2.43
USP34-216ENST00000487547 PRUNE2Q8WUY3 3088 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 LOC107986453A0A1B0GWG9 222 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 TMEM30CPA0ZSE6 113 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 M0R2T5 61 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 IQCJQ1A5X6 159 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 VMO1Q7Z5L0 202 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 BIN3Q9NQY0 253 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 TECPR2O15040 1411 aa-0.15□□□□□ -2.43
USP34-216ENST00000487547 HTTP42858 3142 aa-0.16□□□□□ -2.43
USP34-216ENST00000487547 LRP5O75197 1615 aa-0.16□□□□□ -2.43
USP34-216ENST00000487547 PAPPAQ13219 1627 aa-0.16□□□□□ -2.43
USP34-216ENST00000487547 MUC3AQ02505 3323 aa-0.16□□□□□ -2.43
USP34-216ENST00000487547 HSPG2P98160 4391 aa-0.16□□□□□ -2.43
USP34-216ENST00000487547 UBR2Q8IWV8 1755 aa-0.16□□□□□ -2.43
USP34-216ENST00000487547 TPST1O60507 370 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 EDF1O60869 148 aaKnown RBP-0.16□□□□□ -2.44
USP34-216ENST00000487547 IGF2P01344 180 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 IGKCP01834 107 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 BCL2P10415 239 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 IL7P13232 177 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 S100A11P31949 105 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 GTF2A1P52655 376 aaPredicted RBP-0.16□□□□□ -2.44
USP34-216ENST00000487547 LINC00305Q7Z4B0 112 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 KRTAP8-1Q8IUC2 63 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 DEFB123Q8N688 67 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 TEX29Q8N6K0 151 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 MPC1Q9Y5U8 109 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 LRP1BQ9NZR2 4599 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 USP34Q70CQ2 3546 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 ANK2Q01484 3957 aa-0.16□□□□□ -2.44
USP34-216ENST00000487547 CENPFP49454 3210 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 CTTNBP2Q8WZ74 1663 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 FAT2Q9NYQ8 4349 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 LPAP08519 4548 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.17□□□□□ -2.44
USP34-216ENST00000487547 TMEM189A5PLL7 270 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 CDC42EP2O14613 210 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 MT1BP07438 61 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 MT1HL1P0DM35 61 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 SERPINB1P30740 379 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 CCSMST1Q4G0I0 132 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 C3orf33Q6P1S2 294 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 DCUN1D2Q6PH85 259 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 DEFB132Q7Z7B7 95 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 SMIM7Q9BQ49 75 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 TMEM14BQ9NUH8 114 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 LAMTOR2Q9Y2Q5 125 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 ALMS1Q8TCU4 4167 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 MED13LQ71F56 2210 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 ASXL3Q9C0F0 2248 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 CSMD3Q7Z407 3707 aa-0.17□□□□□ -2.44
USP34-216ENST00000487547 TET3O43151 1660 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 AKAP6Q13023 2319 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 DLC1Q96QB1 1528 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 SMG1Q96Q15 3661 aaKnown RBP-0.18□□□□□ -2.44
USP34-216ENST00000487547 SPAG17Q6Q759 2223 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 PRKDCP78527 4128 aaKnown RBP-0.18□□□□□ -2.44
USP34-216ENST00000487547 DOPEY2Q9Y3R5 2298 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 TRBV27A0A0K0K1C4 114 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 H7BYZ3 331 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 PIN1P1O15428 100 aa-0.18□□□□□ -2.44
USP34-216ENST00000487547 KLKP1Q107X0 134 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms