RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 RTL8CO15255 209 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 CRIP1P50238 77 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 FHL2Q14192 279 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 ESRGQ1W209 222 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 ZFP69Q49AA0 526 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 SMUG1Q53HV7 270 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 DPPA3Q6W0C5 159 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 C9orf62Q8N4C0 152 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 NHLRC2Q8NBF2 726 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 RASL10AQ92737 203 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 HIST1H2BAQ96A08 127 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 SPXQ9BT56 116 aa4.95□□□□□ -1.62
UBE4B-209ENST00000487244 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 C9JCJ5 164 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 H3BNG1 76 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 M0R2P5 195 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 LTAP01374 205 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
UBE4B-209ENST00000487244 AKR1C3P42330 323 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 PPT1P50897 306 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 CRYBA4P53673 196 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 EIF5AP63241 154 aaKnown RBP4.94□□□□□ -1.62
UBE4B-209ENST00000487244 SAPCD1Q5SSQ6 148 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 FMC1Q96HJ9 113 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 KCNS1Q96KK3 526 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 C9orf85Q96MD7 179 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 KRTAP1-5Q9BYS1 174 aa4.94□□□□□ -1.62
UBE4B-209ENST00000487244 NKX6-2Q9C056 277 aaPredicted RBP4.94□□□□□ -1.62
UBE4B-209ENST00000487244 TRAV4A0A0B4J268 109 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 TRGV4A0A0C4DH28 118 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 LOC100131303A0A0U1RQF7 123 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 PGPEP1LA6NFU8 196 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 FBLL1A6NHQ2 334 aaKnown RBP4.93□□□□□ -1.62
UBE4B-209ENST00000487244 M0R036 132 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 SH2D1AO60880 128 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 SULT1A2P50226 295 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 NKX2-5P52952 324 aaPredicted RBP4.93□□□□□ -1.62
UBE4B-209ENST00000487244 CCL18P55774 89 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 FAM3BP58499 235 aaPredicted RBP4.93□□□□□ -1.62
UBE4B-209ENST00000487244 UBE2G1P62253 170 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 ZNF506Q5JVG8 444 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 COX8CQ7Z4L0 72 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 DERL1Q9BUN8 251 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 GNG13Q9P2W3 67 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 PRO0255Q9UI72 69 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 HHLA3Q9XRX5 114 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
UBE4B-209ENST00000487244 TMSB15BA0A087X1C1 80 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 IGHV3-73A0A0B4J1V6 119 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 TRAV1-1A0A0B4J248 108 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 TRBV6-1A0A0K0K1D8 114 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 NBDYA0A0U1RRE5 68 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 FABP5P3A8MUU1 101 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 B4DEV8 164 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 KRBOX1C9JBD0 128 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 H3BVH4 76 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 ORM1P02763 201 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 ZNF674Q2M3X9 581 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 FAM162BQ5T6X4 162 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 CFAP126Q5VTH2 177 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 SLC51BQ86UW2 128 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 OR4C5Q8NGB2 326 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 TCEAL7Q9BRU2 100 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 ZFP30Q9Y2G7 519 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 MRPS16Q9Y3D3 137 aaKnown RBP4.92□□□□□ -1.62
UBE4B-209ENST00000487244 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
UBE4B-209ENST00000487244 A0A1B0GVY2 172 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 K7EQD1 137 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 GYPEP15421 78 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 GATA1P15976 413 aaPredicted RBP4.91□□□□□ -1.62
UBE4B-209ENST00000487244 ASIPP42127 132 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 RPL35P42766 123 aaKnown RBP4.91□□□□□ -1.62
UBE4B-209ENST00000487244 RAB5CP51148 216 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 RPL19P84098 196 aaKnown RBP4.91□□□□□ -1.62
UBE4B-209ENST00000487244 EIF5AL1Q6IS14 154 aaKnown RBP4.91□□□□□ -1.62
UBE4B-209ENST00000487244 ALKAL2Q6UX46 152 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 UPK3BQ9BT76 320 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 Q9H8V8 135 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 JPT2Q9H910 190 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 MANBALQ9NQG1 85 aa4.91□□□□□ -1.62
UBE4B-209ENST00000487244 TRBV20OR9-2A0A075B6H5 130 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 PRSS29PA6NIE9 313 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 RS1O15537 224 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 NXPH4O95158 308 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 ARMS2P0C7Q2 107 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 S100A4P26447 101 aaKnown RBP4.9□□□□□ -1.63
UBE4B-209ENST00000487244 MRPL23Q16540 153 aaKnown RBP4.9□□□□□ -1.63
UBE4B-209ENST00000487244 C1orf134Q5TEV5 83 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 PRR27Q6MZM9 219 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 LYPD5Q6UWN5 251 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 Q6ZSN1 163 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 LINC00336Q6ZUF6 198 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 SLC25A29Q8N8R3 303 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 C11orf52Q96A22 123 aa4.9□□□□□ -1.63
UBE4B-209ENST00000487244 PTH2Q96A98 100 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms