RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 BRI3O95415 125 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 IGF1P05019 195 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 MGPP08493 103 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 TMEM263Q8WUH6 116 aaKnown RBP8.08□□□□□ -1.12
CCDC171-208ENST00000486641 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
CCDC171-208ENST00000486641 TRAV8-4A0A0B4J246 113 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 CDX4O14627 284 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-208ENST00000486641 TMEM170BQ5T4T1 132 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 C9orf47Q6ZRZ4 202 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 GPHB5Q86YW7 130 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 HIF1ANQ9NWT6 349 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 DPM3Q9P2X0 92 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 IGHV3-49A0A0A0MS15 119 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 IGIPA6NJ69 53 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 SCGB2A1O75556 95 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 PMVKQ15126 192 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 TP53TG1Q9Y2A0 90 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 ADGRG4Q8IZF6 3080 aa8.07□□□□□ -1.12
CCDC171-208ENST00000486641 ZDBF2Q9HCK1 2354 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 CLPSL1A2RUU4 121 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 IGHV4-39P01824 125 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 P0DMU3 169 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 DEFB109BQ30KR1 87 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 MEIG1Q5JSS6 88 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 C1orf122Q6ZSJ8 110 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 DEFB123Q8N688 67 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 GPR179Q6PRD1 2367 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 J3QQQ9 107 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 CLEC3BP05452 202 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 ARL3P36405 182 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
CCDC171-208ENST00000486641 TCF15Q12870 199 aa8.06□□□□□ -1.12
CCDC171-208ENST00000486641 RPL13AP40429 203 aaKnown RBP8.05□□□□□ -1.12
CCDC171-208ENST00000486641 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
CCDC171-208ENST00000486641 MUSTN1Q8IVN3 82 aa8.05□□□□□ -1.12
CCDC171-208ENST00000486641 FAM57AQ8TBR7 257 aa8.05□□□□□ -1.12
CCDC171-208ENST00000486641 RP1L1Q8IWN7 2480 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-208ENST00000486641 ARHGAP32A7KAX9 2087 aa8.05□□□□□ -1.12
CCDC171-208ENST00000486641 TRAV2A0A0B4J234 112 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 E7EQL1 145 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
CCDC171-208ENST00000486641 S100A4P26447 101 aaKnown RBP8.04□□□□□ -1.12
CCDC171-208ENST00000486641 PRR30Q53SZ7 412 aaPredicted RBP8.04□□□□□ -1.12
CCDC171-208ENST00000486641 OR10J6PQ8NGY7 276 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 PHLDA3Q9Y5J5 127 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 TNFRSF18Q9Y5U5 241 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 A0A0B4J2C4 111 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 IGHV1-69DA0A0B4J2H0 117 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 C15orf32Q32M92 178 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 LINC01600Q96MT4 127 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 BEX4Q9NWD9 120 aaPredicted RBP8.04□□□□□ -1.12
CCDC171-208ENST00000486641 MDFICQ9P1T7 246 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 LAMA5O15230 3695 aa8.04□□□□□ -1.12
CCDC171-208ENST00000486641 TRBV10-2A0A0K0K1G8 114 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 LGALS9O00182 355 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 Q1RN00 199 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 MRPL53Q96EL3 112 aaKnown RBP8.03□□□□□ -1.12
CCDC171-208ENST00000486641 POLEQ07864 2286 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 A0A0G2JNJ9 132 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 H3BMM0 161 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 UBE2WQ96B02 151 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 CHCHD5Q9BSY4 110 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 Q9UFV3 132 aa8.03□□□□□ -1.12
CCDC171-208ENST00000486641 TPRP12270 2363 aaKnown RBP8.03□□□□□ -1.12
CCDC171-208ENST00000486641 GNRH2O43555 120 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 FOXC1Q12948 553 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 ZNF876PQ49A33 203 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 C3orf56Q8N813 242 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 TMEM141Q96I45 108 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 C20orf173Q96LM9 149 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 WNK2Q9Y3S1 2297 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 DMXL1Q9Y485 3027 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 PPP1R17O96001 155 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 CLEC19AQ6UXS0 136 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 ZFAND2AQ8N6M9 145 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 C16orf92Q96LL3 132 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 SPANXA1Q9NS26 97 aa8.02□□□□□ -1.13
CCDC171-208ENST00000486641 NCOR1O75376 2440 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 TRIAP1O43715 76 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 LY6G5BQ8NDX9 201 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 IGHV3-64A0A075B6Q5 118 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 TRAV21A0A0B4J279 112 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 LEPROTO15243 131 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
CCDC171-208ENST00000486641 LINC00315P59091 139 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 ZNF56Q15929 161 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 C2orf82Q6UX34 121 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 TIMM17AQ99595 171 aa8.01□□□□□ -1.13
CCDC171-208ENST00000486641 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 TMEM223A0PJW6 202 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 H7C423 109 aa8□□□□□ -1.13
CCDC171-208ENST00000486641 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
CCDC171-208ENST00000486641 DEFB1P60022 68 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms