RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 C12orf74Q32Q52 190 aa13.28□□□□□ -0.28
TNXB-205ENST00000486148 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
TNXB-205ENST00000486148 TMEM8BA6NDV4 472 aa13.28□□□□□ -0.28
TNXB-205ENST00000486148 MT-ATP8P03928 68 aa13.28□□□□□ -0.28
TNXB-205ENST00000486148 ATP5LO75964 103 aa13.27□□□□□ -0.28
TNXB-205ENST00000486148 LCNL1Q6ZST4 164 aa13.27□□□□□ -0.28
TNXB-205ENST00000486148 SYT8Q8NBV8 401 aa13.27□□□□□ -0.28
TNXB-205ENST00000486148 DPM2O94777 84 aa13.27□□□□□ -0.29
TNXB-205ENST00000486148 SPINK8P0C7L1 97 aa13.27□□□□□ -0.29
TNXB-205ENST00000486148 Q6ZS46 218 aa13.27□□□□□ -0.29
TNXB-205ENST00000486148 MAPKAPK5-AS1Q8N8E1 139 aa13.27□□□□□ -0.29
TNXB-205ENST00000486148 LINC00477Q96M19 166 aa13.27□□□□□ -0.29
TNXB-205ENST00000486148 PRORYQ9H606 182 aa13.27□□□□□ -0.29
TNXB-205ENST00000486148 A0A1B0GWB2 263 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 F6UB75 175 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 H3BUX3 64 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 M0R381 172 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 ZC2HC1BQ5TFG8 222 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 OR10J6PQ8NGY7 276 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 MRPL35Q9NZE8 188 aaKnown RBP13.26□□□□□ -0.29
TNXB-205ENST00000486148 BLCAPP62952 87 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 RNF183Q96D59 192 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 PIMREGQ9BSJ6 248 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 TMEM160Q9NX00 188 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 IGKV3-7A0A075B6H7 116 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 APOMO95445 188 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 IGHG2P01859 326 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 FOXI1Q12951 378 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
TNXB-205ENST00000486148 OVOL1O14753 267 aa13.25□□□□□ -0.29
TNXB-205ENST00000486148 RPL11P62913 178 aaKnown RBP13.25□□□□□ -0.29
TNXB-205ENST00000486148 PF4V1P10720 104 aa13.25□□□□□ -0.29
TNXB-205ENST00000486148 SRSF1Q07955 248 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNXB-205ENST00000486148 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
TNXB-205ENST00000486148 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
TNXB-205ENST00000486148 TRAV21A0A0B4J279 112 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 SMIM2Q9BVW6 85 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 SS18L2Q9UHA2 77 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 A6NDX4 124 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 SMCPP49901 116 aaPredicted RBP13.24□□□□□ -0.29
TNXB-205ENST00000486148 XGP55808 180 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 NFE4Q86UQ8 179 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 CYSLTR1Q9Y271 337 aa13.24□□□□□ -0.29
TNXB-205ENST00000486148 COL12A1Q99715 3063 aa13.23□□□□□ -0.29
TNXB-205ENST00000486148 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
TNXB-205ENST00000486148 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
TNXB-205ENST00000486148 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
TNXB-205ENST00000486148 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
TNXB-205ENST00000486148 RASL10AQ92737 203 aa13.23□□□□□ -0.29
TNXB-205ENST00000486148 C14orf178Q8N769 122 aaPredicted RBP13.23□□□□□ -0.29
TNXB-205ENST00000486148 FAM19A4Q96LR4 140 aa13.23□□□□□ -0.29
TNXB-205ENST00000486148 CCL19Q99731 98 aa13.23□□□□□ -0.29
TNXB-205ENST00000486148 ASIPP42127 132 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 RPL39LQ96EH5 51 aaKnown RBP13.22□□□□□ -0.29
TNXB-205ENST00000486148 C1QTNF4Q9BXJ3 329 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
TNXB-205ENST00000486148 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 A0A087WX48 190 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 GNRH2O43555 120 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 Q6ZUT4 128 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 ERG28Q9UKR5 140 aa13.22□□□□□ -0.29
TNXB-205ENST00000486148 H3BUA1 57 aa13.21□□□□□ -0.29
TNXB-205ENST00000486148 EDN2P20800 178 aa13.21□□□□□ -0.29
TNXB-205ENST00000486148 PHLDA3Q9Y5J5 127 aa13.21□□□□□ -0.29
TNXB-205ENST00000486148 OR11H12B2RN74 326 aa13.21□□□□□ -0.3
TNXB-205ENST00000486148 BRI3O95415 125 aa13.21□□□□□ -0.3
TNXB-205ENST00000486148 SRD5A1P18405 259 aa13.21□□□□□ -0.3
TNXB-205ENST00000486148 OR11H1Q8NG94 326 aa13.21□□□□□ -0.3
TNXB-205ENST00000486148 OR11H2Q8NH07 326 aa13.21□□□□□ -0.3
TNXB-205ENST00000486148 SUMO2P61956 95 aaKnown RBP13.2□□□□□ -0.3
TNXB-205ENST00000486148 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
TNXB-205ENST00000486148 PGPEP1Q9NXJ5 209 aa13.2□□□□□ -0.3
TNXB-205ENST00000486148 RNF223E7ERA6 249 aa13.19□□□□□ -0.3
TNXB-205ENST00000486148 CFAP126Q5VTH2 177 aa13.19□□□□□ -0.3
TNXB-205ENST00000486148 MORN3Q6PF18 240 aaPredicted RBP13.19□□□□□ -0.3
TNXB-205ENST00000486148 IGLV1-40P01703 118 aa13.19□□□□□ -0.3
TNXB-205ENST00000486148 MGPP08493 103 aa13.19□□□□□ -0.3
TNXB-205ENST00000486148 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
TNXB-205ENST00000486148 HIST1H4GQ99525 98 aa13.19□□□□□ -0.3
TNXB-205ENST00000486148 TRBV7-3A0A075B6L6 115 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 ATP5J2P56134 94 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 TAL2Q16559 108 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 APRG1Q8IVJ8 170 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 HLA-DRB4P13762 266 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 HLA-DRB4X5D2U9 266 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 CELSR2Q9HCU4 2923 aa13.18□□□□□ -0.3
TNXB-205ENST00000486148 AVPP01185 164 aa13.17□□□□□ -0.3
TNXB-205ENST00000486148 ORMDL2Q53FV1 153 aa13.17□□□□□ -0.3
TNXB-205ENST00000486148 ATP6V0E2Q8NHE4 81 aa13.17□□□□□ -0.3
TNXB-205ENST00000486148 TOMM6Q96B49 74 aa13.17□□□□□ -0.3
TNXB-205ENST00000486148 DAZ1Q9NQZ3 744 aaKnown RBP13.17□□□□□ -0.3
TNXB-205ENST00000486148 A6NJY4 79 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 MSMBP08118 114 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 PLNP26678 52 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
TNXB-205ENST00000486148 PTH2Q96A98 100 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms