RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 XGP55808 180 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 IBA57Q5T440 356 aaKnown RBP6.94□□□□□ -1.3
SND1-213ENST00000486037 EBLN2Q6P2I7 272 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 ZFAND2AQ8N6M9 145 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 NDFIP1Q9BT67 221 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 SMCO4Q9NRQ5 59 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 TMEM242Q9NWH2 141 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 LENEPQ9Y5L5 61 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 V9GYV3 84 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
SND1-213ENST00000486037 A8MTW9 85 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 PPP1R2P9O14990 202 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
SND1-213ENST00000486037 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
SND1-213ENST00000486037 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 HLA-DRB4P13762 266 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 MIFP14174 115 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 CRISP2P16562 243 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■■■□□ 18.9
SND1-213ENST00000486037 KIR3DS1Q14943 382 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 SMUG1Q53HV7 270 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 ACTL10Q5JWF8 245 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 AMTNQ6UX39 209 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 C15orf54Q8N8G6 183 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 ODF3Q96PU9 254 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 HLA-DRB4X5D2U9 266 aa6.93□□□□□ -1.3
SND1-213ENST00000486037 TRBV7-9A0A0J9YWB2 115 aa6.92□□□□□ -1.3
SND1-213ENST00000486037 H3BMM0 161 aa6.92□□□□□ -1.3
SND1-213ENST00000486037 J3KRW8 73 aa6.92□□□□□ -1.3
SND1-213ENST00000486037 PFN1P07737 140 aaKnown RBP6.92□□□□□ -1.3
SND1-213ENST00000486037 RPL19P84098 196 aaKnown RBP6.92□□□□□ -1.3
SND1-213ENST00000486037 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
SND1-213ENST00000486037 Q6ZQT7 251 aa6.92□□□□□ -1.3
SND1-213ENST00000486037 OR4B1Q8NGF8 309 aa6.92□□□□□ -1.3
SND1-213ENST00000486037 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
SND1-213ENST00000486037 ZNF705GA8MUZ8 300 aaPredicted RBP6.91□□□□□ -1.3
SND1-213ENST00000486037 KLLNB2CW77 178 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 P01737 135 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 LEPP41159 167 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 ELOBQ15370 118 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 DAZAP1Q96EP5 407 aaKnown RBP6.91□□□□□ -1.3
SND1-213ENST00000486037 IL36BQ9NZH7 164 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 C11orf21Q9P2W6 132 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 URGCP-MRPS24S4R325 110 aa6.91□□□□□ -1.3
SND1-213ENST00000486037 TGIF2-C20orf24A0A0A6YYL0 155 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 NBDYA0A0U1RRE5 68 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 COLCA2A8K830 154 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 M0R2Z0 102 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 GPX1P07203 203 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 CXCL1P09341 107 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 GZMBP10144 247 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 RNASE4P34096 147 aaKnown RBP6.9□□□□□ -1.3
SND1-213ENST00000486037 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
SND1-213ENST00000486037 FXYD7P58549 80 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 SPINK13Q1W4C9 94 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.9□□□□□ -1.3
SND1-213ENST00000486037 OR2D3Q8NGH3 330 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 IMMP2LQ96T52 175 aa6.9□□□□□ -1.3
SND1-213ENST00000486037 LRP2P98164 4655 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 TRAV12-2A0A075B6T6 113 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 TMSB15BA0A087X1C1 80 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 SMIM27A0A1W2PRY6 76 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 TCL1AP56279 114 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 FAM3BP58499 235 aaPredicted RBP6.89□□□□□ -1.31
SND1-213ENST00000486037 CT83Q5H943 113 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 GFI1BQ5VTD9 330 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 Q6AWC8 147 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
SND1-213ENST00000486037 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 GTSF1Q8WW33 167 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 PYGO2Q9BRQ0 406 aa6.89□□□□□ -1.31
SND1-213ENST00000486037 TRBV24-1A0A075B6N3 115 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 TRAV21A0A0B4J279 112 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 C7orf71A4D174 169 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 A8MWL6 223 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 CRXO43186 299 aaPredicted RBP6.88□□□□□ -1.31
SND1-213ENST00000486037 ORM1P02763 201 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
SND1-213ENST00000486037 S100PP25815 95 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 TSPOP30536 169 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 CDKN1BP46527 198 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 KCNIP4Q6PIL6 250 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 STHQ8IWL8 128 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 TSKUQ8WUA8 353 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 FRZBQ92765 325 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 NEU1Q99519 415 aa6.88□□□□□ -1.31
SND1-213ENST00000486037 A0A1W2PPQ1 181 aa6.87□□□□□ -1.31
SND1-213ENST00000486037 GRIFINA4D1Z8 144 aa6.87□□□□□ -1.31
SND1-213ENST00000486037 ZNF324O75467 553 aaPredicted RBP6.87□□□□□ -1.31
SND1-213ENST00000486037 ANXA2RQ3ZCQ2 193 aa6.87□□□□□ -1.31
SND1-213ENST00000486037 MUC21Q5SSG8 566 aa6.87□□□□□ -1.31
SND1-213ENST00000486037 MORN3Q6PF18 240 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms