RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 GNRH2O43555 120 aa16.98■□□□□ 0.31
CLN5-202ENST00000485938 APRG1Q8IVJ8 170 aa16.98■□□□□ 0.31
CLN5-202ENST00000485938 PRADC1Q9BSG0 188 aa16.98■□□□□ 0.31
CLN5-202ENST00000485938 IGHV3OR16-10A0A075B7F0 116 aa16.98■□□□□ 0.31
CLN5-202ENST00000485938 RNASE3P12724 160 aaKnown RBP16.98■□□□□ 0.31
CLN5-202ENST00000485938 F6UB75 175 aa16.97■□□□□ 0.31
CLN5-202ENST00000485938 LY6DQ14210 128 aa16.97■□□□□ 0.31
CLN5-202ENST00000485938 ITPR1Q14643 2758 aa16.97■□□□□ 0.31
CLN5-202ENST00000485938 MORN3Q6PF18 240 aaPredicted RBP16.97■□□□□ 0.31
CLN5-202ENST00000485938 POM121L12Q8N7R1 296 aa16.97■□□□□ 0.31
CLN5-202ENST00000485938 PRO0461Q9UI25 63 aa16.97■□□□□ 0.31
CLN5-202ENST00000485938 PPP1R17O96001 155 aa16.96■□□□□ 0.3
CLN5-202ENST00000485938 SH2D6Q7Z4S9 175 aa16.96■□□□□ 0.3
CLN5-202ENST00000485938 GAGE13Q4V321 117 aa16.95■□□□□ 0.3
CLN5-202ENST00000485938 AKAP6Q13023 2319 aa16.95■□□□□ 0.3
CLN5-202ENST00000485938 NXPH4O95158 308 aa16.95■□□□□ 0.3
CLN5-202ENST00000485938 ETDBQ3ZM63 59 aa16.95■□□□□ 0.3
CLN5-202ENST00000485938 ZNF815PA8K554 130 aa16.94■□□□□ 0.3
CLN5-202ENST00000485938 HOXA3O43365 443 aaPredicted RBP16.94■□□□□ 0.3
CLN5-202ENST00000485938 COX6B1P14854 86 aa16.94■□□□□ 0.3
CLN5-202ENST00000485938 RPL11P62913 178 aaKnown RBP16.94■□□□□ 0.3
CLN5-202ENST00000485938 SAMD13Q5VXD3 122 aa16.94■□□□□ 0.3
CLN5-202ENST00000485938 TRBV7-9A0A0J9YWB2 115 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 LINC00315P59091 139 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 CD300EQ496F6 205 aaPredicted RBP16.93■□□□□ 0.3
CLN5-202ENST00000485938 TSSC4Q9Y5U2 329 aaPredicted RBP16.93■□□□□ 0.3
CLN5-202ENST00000485938 KIF25-AS1Q9Y6Z4 181 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 IGHV1-69DA0A0B4J2H0 117 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 J3QR89 54 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 DUSP14O95147 198 aaKnown RBP16.93■□□□□ 0.3
CLN5-202ENST00000485938 IGHV1-69P01742 117 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 CRYGDP07320 174 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 SCGB2A2Q13296 93 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 MUC4Q99102 2169 aa16.93■□□□□ 0.3
CLN5-202ENST00000485938 HIVEP3Q5T1R4 2406 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 IGHV3-11P01762 117 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 BRD3OSQ6XYD6 125 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 ABCA2Q9BZC7 2435 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 AZU1P20160 251 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 MTURNQ8N3F0 131 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 PLEKHB2Q96CS7 222 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 USMG5Q96IX5 58 aa16.92■□□□□ 0.3
CLN5-202ENST00000485938 SPAG8Q99932 426 aaPredicted RBP16.92■□□□□ 0.3
CLN5-202ENST00000485938 LCNL1Q6ZST4 164 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 SIGMAR1Q99720 223 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 GTSF1LQ9H1H1 148 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 IGKV3-7A0A075B6H7 116 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 IGHV4OR15-8A0A075B7B6 117 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 A0A087WW49 117 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 GAGE12HA6NDE8 117 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 BRI3O95415 125 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 TSHBP01222 138 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 RPL32P62910 135 aaKnown RBP16.91■□□□□ 0.3
CLN5-202ENST00000485938 PGPEP1Q9NXJ5 209 aa16.91■□□□□ 0.3
CLN5-202ENST00000485938 IGLV4-69A0A075B6H9 119 aa16.9■□□□□ 0.3
CLN5-202ENST00000485938 SCGB1D4Q6XE38 83 aa16.9■□□□□ 0.3
CLN5-202ENST00000485938 RHPN1-AS1Q9BWJ2 59 aa16.9■□□□□ 0.3
CLN5-202ENST00000485938 H3BUA1 57 aa16.89■□□□□ 0.29
CLN5-202ENST00000485938 ZFHX3Q15911 3703 aa16.89■□□□□ 0.29
CLN5-202ENST00000485938 TMEM238LA0A1B0GVL6 79 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 IGIPA6NJ69 53 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 C11orf86A6NJI1 115 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 A6NJY4 79 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 UBE2D1P51668 147 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 TP53TG1Q9Y2A0 90 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 IGHG2P01859 326 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 KLHL30-AS1Q8NEE0 82 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 SPATA25Q9BR10 227 aa16.88■□□□□ 0.29
CLN5-202ENST00000485938 MRPL16Q9NX20 251 aaKnown RBP16.88■□□□□ 0.29
CLN5-202ENST00000485938 KLLNB2CW77 178 aa16.87■□□□□ 0.29
CLN5-202ENST00000485938 SCGB1A1P11684 91 aa16.87■□□□□ 0.29
CLN5-202ENST00000485938 POLR2KP53803 58 aaKnown RBP16.87■□□□□ 0.29
CLN5-202ENST00000485938 LY6EQ16553 131 aa16.87■□□□□ 0.29
CLN5-202ENST00000485938 ZFP2Q6ZN57 461 aa16.87■□□□□ 0.29
CLN5-202ENST00000485938 PF4V1P10720 104 aa16.86■□□□□ 0.29
CLN5-202ENST00000485938 SRSF9Q13242 221 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLN5-202ENST00000485938 JPT2Q9H910 190 aa16.86■□□□□ 0.29
CLN5-202ENST00000485938 PIEZO1Q92508 2521 aa16.86■□□□□ 0.29
CLN5-202ENST00000485938 LINC01549A6NIU2 74 aa16.86■□□□□ 0.29
CLN5-202ENST00000485938 IGHV4-39P01824 125 aa16.86■□□□□ 0.29
CLN5-202ENST00000485938 SUMO4Q6EEV6 95 aa16.86■□□□□ 0.29
CLN5-202ENST00000485938 SMAGPQ0VAQ4 97 aa16.85■□□□□ 0.29
CLN5-202ENST00000485938 PAPPA-AS1Q5QFB9 102 aa16.85■□□□□ 0.29
CLN5-202ENST00000485938 INSL3P51460 131 aa16.85■□□□□ 0.29
CLN5-202ENST00000485938 EMP1P54849 157 aa16.85■□□□□ 0.29
CLN5-202ENST00000485938 PMVKQ15126 192 aa16.85■□□□□ 0.29
CLN5-202ENST00000485938 CD7P09564 240 aa16.84■□□□□ 0.29
CLN5-202ENST00000485938 SRD5A1P18405 259 aa16.84■□□□□ 0.29
CLN5-202ENST00000485938 FAM159AQ6UWV7 190 aa16.84■□□□□ 0.29
CLN5-202ENST00000485938 DAZ1Q9NQZ3 744 aaKnown RBP16.84■□□□□ 0.29
CLN5-202ENST00000485938 SPTAN1Q13813 2472 aaKnown RBP16.84■□□□□ 0.29
CLN5-202ENST00000485938 TSPAN13O95857 204 aa16.84■□□□□ 0.29
CLN5-202ENST00000485938 RPL39P62891 51 aaKnown RBP16.84■□□□□ 0.29
CLN5-202ENST00000485938 DEFB104AQ8WTQ1 72 aa16.84■□□□□ 0.29
CLN5-202ENST00000485938 VCYO14598 125 aa16.83■□□□□ 0.28
CLN5-202ENST00000485938 HERVK_113P61574 105 aa16.83■□□□□ 0.28
CLN5-202ENST00000485938 DLX4Q92988 240 aaPredicted RBP16.83■□□□□ 0.28
CLN5-202ENST00000485938 TMEM141Q96I45 108 aa16.83■□□□□ 0.28
CLN5-202ENST00000485938 A0A0J9YY99 117 aa16.82■□□□□ 0.28
CLN5-202ENST00000485938 A6NDX4 124 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms