RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 MPV17LQ2QL34 196 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 PSMG4Q5JS54 123 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 S100A7L2Q5SY68 101 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 SPANXN1Q5VSR9 72 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 RPL7L1Q6DKI1 246 aaKnown RBP3.17□□□□□ -1.9
RTN4-213ENST00000485749 Q8N7P7 452 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 POM121L12Q8N7R1 296 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 PFN4Q8NHR9 129 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 C7orf33Q8WU49 177 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 PPP1R1CQ8WVI7 109 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 LINC00467Q9BRT7 94 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 NMES1Q9C002 83 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 C8orf17Q9NRJ1 99 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 NUP210LQ5VU65 1888 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 NLRC5Q86WI3 1866 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 MYO16Q9Y6X6 1858 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 NUP205Q92621 2012 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 TRBV6-7A0A0A0MS04 114 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-35A0A0C4DH35 117 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-66A0A0C4DH42 116 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 KRTAP4-16G5E9R7 235 aaPredicted RBP3.16□□□□□ -1.9
RTN4-213ENST00000485749 K7EM74 188 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 PIN1P1O15428 100 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 CCL16O15467 120 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 SERF1AO75920 110 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 NPYP01303 97 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 CCKP06307 115 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 RNASE2P10153 161 aaKnown RBP3.16□□□□□ -1.9
RTN4-213ENST00000485749 FXYD6P3P58550 94 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 UBE2G1P62253 170 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 KISS1Q15726 138 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 GTSF1Q8WW33 167 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 NABP2Q9BQ15 211 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 SMIM7Q9BQ49 75 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 UPK3BQ9BT76 320 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 CHCHD7Q9BUK0 85 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 SCRT2Q9NQ03 307 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 NHP2Q9NX24 153 aaKnown RBP3.16□□□□□ -1.9
RTN4-213ENST00000485749 PRO0461Q9UI25 63 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 PTPRDP23468 1912 aa3.16□□□□□ -1.9
RTN4-213ENST00000485749 ZNF638Q14966 1978 aaKnown RBP3.16□□□□□ -1.9
RTN4-213ENST00000485749 TNRC6AQ8NDV7 1962 aaKnown RBP3.16□□□□□ -1.9
RTN4-213ENST00000485749 THSD7BQ9C0I4 1608 aa3.15□□□□□ -1.9
RTN4-213ENST00000485749 DENND4CQ5VZ89 1909 aa3.15□□□□□ -1.9
RTN4-213ENST00000485749 A0A1B0GWA3 101 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 A6NED7 52 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 E7EQL1 145 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 SLC25A20O43772 301 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 IGLV2-23P01705 113 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 IGHV3-23P01764 117 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 ASAH2BP0C7U1 165 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 IL9P15248 144 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
RTN4-213ENST00000485749 ZNF816Q0VGE8 651 aaPredicted RBP3.15□□□□□ -1.91
RTN4-213ENST00000485749 RHOHQ15669 191 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 LPAL2Q16609 132 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 Q6ZQT7 251 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 ZFAND2AQ8N6M9 145 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 CNEP1R1Q8N9A8 125 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 CCL4L1Q8NHW4 92 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 RETNLBQ9BQ08 111 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
RTN4-213ENST00000485749 DOCK6Q96HP0 2047 aa3.15□□□□□ -1.91
RTN4-213ENST00000485749 DOCK4Q8N1I0 1966 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
RTN4-213ENST00000485749 LOC107984156A0A0G2JMH3 177 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 A6NN06 94 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 F2Z2F3 143 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 APCSP02743 223 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 HSPB1P04792 205 aaKnown RBP3.14□□□□□ -1.91
RTN4-213ENST00000485749 MSMBP08118 114 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 IGHV3-30-3P0DP02 117 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 CCL3P10147 92 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 MIAQ16674 131 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
RTN4-213ENST00000485749 TMEM170BQ5T4T1 132 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 CFAP126Q5VTH2 177 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 ZFP2Q6ZN57 461 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 CYP2G1PQ6ZSU1 146 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 ARL17AQ8IVW1 177 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 RPRMLQ8N4K4 120 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 DYNLRB2Q8TF09 96 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 COX14Q96I36 57 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 ZNF414Q96IQ9 312 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 TTTY10Q9BZA0 68 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 C11orf1Q9H5F2 150 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 BRWD3Q6RI45 1802 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 FANCMQ8IYD8 2048 aa3.14□□□□□ -1.91
RTN4-213ENST00000485749 GREB1Q4ZG55 1949 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 IGLV11-55A0A075B6I3 123 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 IGKV3D-20A0A0C4DH25 116 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 IGHV5-51A0A0C4DH38 117 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 IGHV5-10-1A0A0J9YXX1 117 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 A0A1W2PQD3 144 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 hDV103S1A0JD37 113 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 C17orf51A8MQB3 221 aa3.13□□□□□ -1.91
RTN4-213ENST00000485749 IGFBP7Q16270 282 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms