RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 IGHV4-4A0A075B6R2 117 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 XKRY2A2RUG3 117 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 C7orf77A4D0Y5 90 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 APOC3P02656 99 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 CTRLP40313 264 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 WDR73Q6P4I2 378 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 SVBPQ8N300 66 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 RASL10AQ92737 203 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 EDA2RQ9HAV5 297 aa11.29□□□□□ -0.6
APOE-205ENST00000485628 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
APOE-205ENST00000485628 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
APOE-205ENST00000485628 DEFB4AO15263 64 aa11.28□□□□□ -0.6
APOE-205ENST00000485628 RHEBQ15382 184 aa11.28□□□□□ -0.6
APOE-205ENST00000485628 CTDSP1Q9GZU7 261 aa11.28□□□□□ -0.6
APOE-205ENST00000485628 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 F2Z2F3 143 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 H3BVH4 76 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 M0R2P5 195 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 FER1L6-AS1Q8NA97 138 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 NDUFAF3Q9BU61 184 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
APOE-205ENST00000485628 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 U3KQK5 164 aa11.27□□□□□ -0.61
APOE-205ENST00000485628 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 SNURFLB1AK76 121 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 SNAPINO95295 136 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 FAM222AQ5U5X8 452 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 ATRAIDQ6UW56 229 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
APOE-205ENST00000485628 HIGD1CA8MV81 97 aa11.25□□□□□ -0.61
APOE-205ENST00000485628 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
APOE-205ENST00000485628 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
APOE-205ENST00000485628 Q6ZTI0 123 aa11.25□□□□□ -0.61
APOE-205ENST00000485628 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
APOE-205ENST00000485628 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
APOE-205ENST00000485628 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
APOE-205ENST00000485628 TGP01266 2768 aa11.24□□□□□ -0.61
APOE-205ENST00000485628 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
APOE-205ENST00000485628 SPART-AS1P0CW21 52 aa11.24□□□□□ -0.61
APOE-205ENST00000485628 EMP1P54849 157 aa11.23□□□□□ -0.61
APOE-205ENST00000485628 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
APOE-205ENST00000485628 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
APOE-205ENST00000485628 NAT8BQ9UHF3 227 aa11.23□□□□□ -0.61
APOE-205ENST00000485628 CACNG7P62955 275 aa11.22□□□□□ -0.61
APOE-205ENST00000485628 ZNF876PQ49A33 203 aa11.22□□□□□ -0.61
APOE-205ENST00000485628 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
APOE-205ENST00000485628 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
APOE-205ENST00000485628 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
APOE-205ENST00000485628 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 RS1O15537 224 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 ATP6V1G1O75348 118 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 NTF3P20783 257 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 ZFP82Q8N141 532 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 PGLYRP4Q96LB8 373 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 YPEL4Q96NS1 127 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.61
APOE-205ENST00000485628 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 CXorf65A6NEN9 183 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 CRYGDP07320 174 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
APOE-205ENST00000485628 LINC00315P59091 139 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 JPT2Q9H910 190 aa11.2□□□□□ -0.62
APOE-205ENST00000485628 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 A0A1B0GUT8 65 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 GAGE12BA1L429 117 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 GAGE7O76087 117 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 GAGE12GP0CL81 117 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 GAGE12IP0CL82 117 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 S100A1P23297 94 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
APOE-205ENST00000485628 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
APOE-205ENST00000485628 M0R381 172 aa11.18□□□□□ -0.62
APOE-205ENST00000485628 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
APOE-205ENST00000485628 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
APOE-205ENST00000485628 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
APOE-205ENST00000485628 TPPP3Q9BW30 176 aa11.18□□□□□ -0.62
APOE-205ENST00000485628 A8MWV9 139 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 CIDEAO60543 219 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 DAD1P61803 113 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 ZFP2Q6ZN57 461 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 ATP5L2Q7Z4Y8 100 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
APOE-205ENST00000485628 NANOS2P60321 138 aaKnown RBP11.16□□□□□ -0.62
APOE-205ENST00000485628 FHL2Q14192 279 aa11.16□□□□□ -0.62
APOE-205ENST00000485628 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
APOE-205ENST00000485628 A0A1B0GW15 77 aa11.15□□□□□ -0.62
APOE-205ENST00000485628 EVI2AP22794 236 aa11.15□□□□□ -0.62
APOE-205ENST00000485628 ELOBQ15370 118 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms