RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 RHEBQ15382 184 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 FAM222AQ5U5X8 452 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 GFRA4Q9GZZ7 299 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 M0R2P5 195 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 FOXA3P55318 350 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-207ENST00000485465 CTDSP1Q9GZU7 261 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 CELA1Q9UNI1 258 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 TENM3Q9P273 2699 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
CHMP3-207ENST00000485465 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 SMIM27A0A1W2PRY6 76 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 F2Z2F3 143 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 LGALS9BQ3B8N2 356 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 LYZL1Q6UWQ5 148 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 PTH2Q96A98 100 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 RPS10P5Q9NQ39 176 aa12.54□□□□□ -0.4
CHMP3-207ENST00000485465 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
CHMP3-207ENST00000485465 A0A087WWC5 75 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 TEX48A0A1B0GUV7 120 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 CTRLP40313 264 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 Q6ZTI0 123 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 OR10AG1Q8NH19 301 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 RASL10AQ92737 203 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 PGLYRP4Q96LB8 373 aa12.53□□□□□ -0.4
CHMP3-207ENST00000485465 MUC21A0A0G2JKD1 596 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 MUC21A0A140T8X8 626 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 SYT8Q8NBV8 401 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 NAT8BQ9UHF3 227 aa12.52□□□□□ -0.41
CHMP3-207ENST00000485465 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 M0R381 172 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 GAGE7O76087 117 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 NXPH4O95158 308 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 CACNG7P62955 275 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 SPANXN1Q5VSR9 72 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 EDA2RQ9HAV5 297 aa12.51□□□□□ -0.41
CHMP3-207ENST00000485465 IGHV4-4A0A075B6R2 117 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 SSTP61278 116 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 ATRAIDQ6UW56 229 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 IMMP2LQ96T52 175 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 CNFNQ9BYD5 112 aa12.5□□□□□ -0.41
CHMP3-207ENST00000485465 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
CHMP3-207ENST00000485465 DAD1P61803 113 aa12.49□□□□□ -0.41
CHMP3-207ENST00000485465 C12orf74Q32Q52 190 aa12.49□□□□□ -0.41
CHMP3-207ENST00000485465 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
CHMP3-207ENST00000485465 NTF3P20783 257 aa12.48□□□□□ -0.41
CHMP3-207ENST00000485465 FAM3BP58499 235 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-207ENST00000485465 NANOS2P60321 138 aaKnown RBP12.48□□□□□ -0.41
CHMP3-207ENST00000485465 BORCS7Q96B45 105 aa12.48□□□□□ -0.41
CHMP3-207ENST00000485465 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
CHMP3-207ENST00000485465 MUC4Q99102 2169 aa12.47□□□□□ -0.41
CHMP3-207ENST00000485465 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
CHMP3-207ENST00000485465 TWIST1Q15672 202 aa12.47□□□□□ -0.41
CHMP3-207ENST00000485465 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
CHMP3-207ENST00000485465 A8MWV9 139 aa12.46□□□□□ -0.41
CHMP3-207ENST00000485465 RS1O15537 224 aa12.46□□□□□ -0.41
CHMP3-207ENST00000485465 S100A1P23297 94 aa12.46□□□□□ -0.41
CHMP3-207ENST00000485465 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.41
CHMP3-207ENST00000485465 POM121L12Q8N7R1 296 aa12.46□□□□□ -0.41
CHMP3-207ENST00000485465 JPT2Q9H910 190 aa12.46□□□□□ -0.41
CHMP3-207ENST00000485465 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
CHMP3-207ENST00000485465 S100PP25815 95 aa12.45□□□□□ -0.42
CHMP3-207ENST00000485465 RIGQ13278 110 aa12.45□□□□□ -0.42
CHMP3-207ENST00000485465 CFAP126Q5VTH2 177 aa12.45□□□□□ -0.42
CHMP3-207ENST00000485465 OR4C5Q8NGB2 326 aa12.45□□□□□ -0.42
CHMP3-207ENST00000485465 Q6ZTC4 211 aa12.44□□□□□ -0.42
CHMP3-207ENST00000485465 IGHV3-53P01767 116 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 AP1S3Q96PC3 154 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 SAMD10Q9BYL1 202 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 URGCP-MRPS24S4R325 110 aa12.43□□□□□ -0.42
CHMP3-207ENST00000485465 TRAV9-1A0A075B6T8 112 aa12.42□□□□□ -0.42
CHMP3-207ENST00000485465 A0A087WWL8 130 aa12.42□□□□□ -0.42
CHMP3-207ENST00000485465 ATP5G1P05496 136 aa12.42□□□□□ -0.42
CHMP3-207ENST00000485465 CRYGDP07320 174 aa12.42□□□□□ -0.42
CHMP3-207ENST00000485465 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms