RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, human

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-215	ENST00000484203	PKHD1	P08F94	4074 aa		4.26	□□□□□ -1.73
PTCD3-215	ENST00000484203	FAT2	Q9NYQ8	4349 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	FXYD6-FXYD2	A0A087WZ82	144 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203		A0A096LPF7	62 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	TRAV4	A0A0B4J268	109 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	SIVA1	O15304	175 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	TCRA	P04437	139 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	PFN1	P07737	140 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	PRB4	P10163	310 aa	Predicted RBP	4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	CRYBA4	P53673	196 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	SMUG1	Q53HV7	270 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	PIK3CD-AS1	Q5SR53	167 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	MUC21	Q5SSG8	566 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	AKR1C8P	Q5T2L2	129 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	C10orf126	Q8N4M7	172 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	CYB561D1	Q8N8Q1	229 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	TMEM75	Q8N9X5	138 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	OR4C5	Q8NGB2	326 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	OR2T35	Q8NGX2	323 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	STOML3	Q8TAV4	291 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	HIST1H2BA	Q96A08	127 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	PTH2	Q96A98	100 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	VSIG2	Q96IQ7	327 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	MRPL16	Q9NX20	251 aa	Known RBP	4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	NAGK	Q9UJ70	344 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	EPDR1	Q9UM22	224 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	RPH3AL	Q9UNE2	315 aa		4.25	□□□□□ -1.73
PTCD3-215	ENST00000484203	DNAH2	Q9P225	4427 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	IGHV3-16	A0A0C4DH30	117 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	CTXND1	A0A1B0GTU2	59 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	C16orf90	A8MZG2	172 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	IFNA7	P01567	189 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	EVI2A	P22794	236 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	EIF5A	P63241	154 aa	Known RBP	4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	FLI1	Q01543	452 aa	Predicted RBP	4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	PRR9	Q5T870	116 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	PRADC1	Q9BSG0	188 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	MDFIC	Q9P1T7	246 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	PSG8	Q9UQ74	426 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	ZFP30	Q9Y2G7	519 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	LY96	Q9Y6Y9	160 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	ARL2-SNX15	V9GYD0	113 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	DNAH17	Q9UFH2	4485 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	HERC2	O95714	4834 aa		4.24	□□□□□ -1.73
PTCD3-215	ENST00000484203	TRBV6-4	A0A1B0GX49	114 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	FABP5P3	A8MUU1	101 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	UMAD1	C9J7I0	102 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203		K7EQD1	137 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	CDK2AP2	O75956	126 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	NXPH4	O95158	308 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	IGHV3-53	P01767	116 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	S100A9	P06702	114 aa	Known RBP	4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	MGST1	P10620	155 aa	Known RBP	4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	S100A4	P26447	101 aa	Known RBP	4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	FHIT	P49789	147 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	RHOH	Q15669	191 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	ZNF876P	Q49A33	203 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	RPL7L1	Q6DKI1	246 aa	Known RBP	4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	LYPD5	Q6UWN5	251 aa		4.23	□□□□□ -1.73
PTCD3-215	ENST00000484203	DNAH11	Q96DT5	4516 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	TRAV8-1	A0A0A6YYK1	113 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	TRAV8-6	A0A0B4J262	113 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203		A0A0D9SG52	128 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	RNF222	A6NCQ9	220 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203		A8MWV9	139 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	GGTLC3	B5MD39	225 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	HMGB3	O15347	200 aa	Known RBP	4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	GCG	P01275	180 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	GATA1	P15976	413 aa	Predicted RBP	4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	ERVFC1-1	P60608	527 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	ZNF345	Q14585	488 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	DPPA3	Q6W0C5	159 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	ZFP2	Q6ZN57	461 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	COX8C	Q7Z4L0	72 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	PRNT	Q86SH4	94 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	PRSS3P2	Q8NHM4	247 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	RPL36AL	Q969Q0	106 aa	Known RBP	4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	FMC1	Q96HJ9	113 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	ZNF479	Q96JC4	524 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	KIAA1109	Q2LD37	5005 aa		4.22	□□□□□ -1.73
PTCD3-215	ENST00000484203	TRBV6-1	A0A0K0K1D8	114 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	MAP1LC3B2	A6NCE7	125 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	HMSD	A8MTL9	139 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	RHOD	O00212	210 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	PEX7	O00628	323 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	ARPC5	O15511	151 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	GNRH2	O43555	120 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	IGLV2-11	P01706	119 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	TYMS	P04818	313 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	SFTA3	P0C7M3	94 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	SEC11B	P0C7V7	166 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	DNAH10OS	P0CZ25	163 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	ASIP	P42127	132 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	FGF8	P55075	233 aa	Predicted RBP	4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	UBE2G1	P62253	170 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	GNG5	P63218	68 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203		Q5BKY6	102 aa		4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	EIF5AL1	Q6IS14	154 aa	Known RBP	4.21	□□□□□ -1.74
PTCD3-215	ENST00000484203	NHLRC2	Q8NBF2	726 aa		4.21	□□□□□ -1.74

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