RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TWIST1Q15672 202 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 ANXA2RQ3ZCQ2 193 aa19.45■□□□□ 0.7
SHOX2-204ENST00000483851 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.45■□□□□ 0.7
SHOX2-204ENST00000483851 TMEM191AQ9H0A3 160 aa19.44■□□□□ 0.7
SHOX2-204ENST00000483851 PF4P02776 101 aa19.43■□□□□ 0.7
SHOX2-204ENST00000483851 ASIPP42127 132 aa19.43■□□□□ 0.7
SHOX2-204ENST00000483851 WNK1Q9H4A3 2382 aa19.43■□□□□ 0.7
SHOX2-204ENST00000483851 CRXO43186 299 aaPredicted RBP19.43■□□□□ 0.7
SHOX2-204ENST00000483851 FAM159AQ6UWV7 190 aa19.43■□□□□ 0.7
SHOX2-204ENST00000483851 FAM110AQ9BQ89 295 aa19.43■□□□□ 0.7
SHOX2-204ENST00000483851 PMCHL1Q16048 86 aa19.42■□□□□ 0.7
SHOX2-204ENST00000483851 LINC00482Q8N8I6 264 aa19.42■□□□□ 0.7
SHOX2-204ENST00000483851 KNCNA6PVL3 124 aa19.41■□□□□ 0.7
SHOX2-204ENST00000483851 IGKV3-20P01619 116 aa19.41■□□□□ 0.7
SHOX2-204ENST00000483851 SPATA12Q7Z6I5 190 aa19.41■□□□□ 0.7
SHOX2-204ENST00000483851 SORL1Q92673 2214 aa19.41■□□□□ 0.7
SHOX2-204ENST00000483851 TRAV12-3A0A0B4J271 114 aa19.4■□□□□ 0.7
SHOX2-204ENST00000483851 EREGO14944 169 aa19.4■□□□□ 0.7
SHOX2-204ENST00000483851 S100A4P26447 101 aaKnown RBP19.4■□□□□ 0.7
SHOX2-204ENST00000483851 SPINK13Q1W4C9 94 aa19.4■□□□□ 0.7
SHOX2-204ENST00000483851 ODF3L2Q3SX64 289 aa19.4■□□□□ 0.7
SHOX2-204ENST00000483851 CITED1Q99966 193 aa19.4■□□□□ 0.7
SHOX2-204ENST00000483851 SCRT2Q9NQ03 307 aa19.4■□□□□ 0.7
SHOX2-204ENST00000483851 MUC21Q5SSG8 566 aa19.39■□□□□ 0.7
SHOX2-204ENST00000483851 AMN1Q8IY45 258 aa19.39■□□□□ 0.7
SHOX2-204ENST00000483851 TMEM70Q9BUB7 260 aa19.39■□□□□ 0.7
SHOX2-204ENST00000483851 SNHG12Q9BXW3 62 aa19.39■□□□□ 0.7
SHOX2-204ENST00000483851 SPATA45Q537H7 98 aa19.39■□□□□ 0.69
SHOX2-204ENST00000483851 LINC00173Q6ZV60 143 aa19.39■□□□□ 0.69
SHOX2-204ENST00000483851 MRPL52Q86TS9 123 aaKnown RBP19.39■□□□□ 0.69
SHOX2-204ENST00000483851 OR11H12B2RN74 326 aa19.38■□□□□ 0.69
SHOX2-204ENST00000483851 H3BVH4 76 aa19.38■□□□□ 0.69
SHOX2-204ENST00000483851 MRPL51Q4U2R6 128 aaKnown RBP19.38■□□□□ 0.69
SHOX2-204ENST00000483851 OR10AG1Q8NH19 301 aa19.38■□□□□ 0.69
SHOX2-204ENST00000483851 MUC21A0A0G2JKD1 596 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 MUC21A0A140T8X8 626 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 LEPROTL1O95214 131 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 SPANXN1Q5VSR9 72 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 SMIM15Q7Z3B0 74 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 AGRNO00468 2067 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 D6R8Y8 96 aa19.37■□□□□ 0.69
SHOX2-204ENST00000483851 MSRB1Q9NZV6 116 aa19.36■□□□□ 0.69
SHOX2-204ENST00000483851 TRAV12-2A0A075B6T6 113 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 SYS1-DBNDD2H3BUS1 97 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 INSL3P51460 131 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 BEAN1Q3B7T3 259 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 ZNF705AQ6ZN79 300 aaPredicted RBP19.35■□□□□ 0.69
SHOX2-204ENST00000483851 ORMDL3Q8N138 153 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 PRELID3AQ96N28 172 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 AP5S1Q9NUS5 200 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 IGHV1OR15-1A0A075B7D0 117 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 M0R143 59 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 GNRH2O43555 120 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 IGLC3P0DOY3 106 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 RNASE3P12724 160 aaKnown RBP19.35■□□□□ 0.69
SHOX2-204ENST00000483851 SSTP61278 116 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 PHLDA3Q9Y5J5 127 aa19.35■□□□□ 0.69
SHOX2-204ENST00000483851 A0A1B0GV90 55 aa19.34■□□□□ 0.69
SHOX2-204ENST00000483851 PPBPP02775 128 aa19.34■□□□□ 0.69
SHOX2-204ENST00000483851 TRAV9-2A0A087WT02 112 aa19.33■□□□□ 0.69
SHOX2-204ENST00000483851 RBMY1BA6NDE4 496 aaKnown RBP19.33■□□□□ 0.69
SHOX2-204ENST00000483851 RBMY1EA6NEQ0 496 aaKnown RBP19.33■□□□□ 0.69
SHOX2-204ENST00000483851 RBMY1DP0C7P1 496 aaKnown RBP19.33■□□□□ 0.69
SHOX2-204ENST00000483851 ZNF124Q15973 351 aa19.33■□□□□ 0.69
SHOX2-204ENST00000483851 ATOH7Q8N100 152 aa19.33■□□□□ 0.69
SHOX2-204ENST00000483851 RNF185Q96GF1 192 aa19.33■□□□□ 0.69
SHOX2-204ENST00000483851 CD7P09564 240 aa19.33■□□□□ 0.68
SHOX2-204ENST00000483851 NXPH4O95158 308 aa19.32■□□□□ 0.68
SHOX2-204ENST00000483851 MAJINQ3KP22 176 aa19.32■□□□□ 0.68
SHOX2-204ENST00000483851 PRSS3P2Q8NHM4 247 aa19.32■□□□□ 0.68
SHOX2-204ENST00000483851 C20orf202A1L168 122 aa19.31■□□□□ 0.68
SHOX2-204ENST00000483851 IFI27P40305 119 aaPredicted RBP19.31■□□□□ 0.68
SHOX2-204ENST00000483851 FA2HQ7L5A8 372 aa19.31■□□□□ 0.68
SHOX2-204ENST00000483851 STHQ8IWL8 128 aa19.31■□□□□ 0.68
SHOX2-204ENST00000483851 HSPB8Q9UJY1 196 aa19.31■□□□□ 0.68
SHOX2-204ENST00000483851 A0A096LNJ9 63 aa19.3■□□□□ 0.68
SHOX2-204ENST00000483851 PET117Q6UWS5 81 aa19.3■□□□□ 0.68
SHOX2-204ENST00000483851 UQCR10Q9UDW1 63 aa19.3■□□□□ 0.68
SHOX2-204ENST00000483851 LAMTOR2Q9Y2Q5 125 aa19.3■□□□□ 0.68
SHOX2-204ENST00000483851 TRGV11A0A075B6L2 103 aa19.29■□□□□ 0.68
SHOX2-204ENST00000483851 TRPT1Q86TN4 253 aaKnown RBP19.29■□□□□ 0.68
SHOX2-204ENST00000483851 LINC00467Q9BRT7 94 aa19.29■□□□□ 0.68
SHOX2-204ENST00000483851 IGHV3-16A0A0C4DH30 117 aa19.28■□□□□ 0.68
SHOX2-204ENST00000483851 C9orf85Q96MD7 179 aa19.28■□□□□ 0.68
SHOX2-204ENST00000483851 CKS2P33552 79 aa19.28■□□□□ 0.68
SHOX2-204ENST00000483851 NUTF2P61970 127 aaKnown RBP19.28■□□□□ 0.68
SHOX2-204ENST00000483851 C9orf66Q5T8R8 295 aa19.28■□□□□ 0.68
SHOX2-204ENST00000483851 ZNF747Q9BV97 191 aa19.28■□□□□ 0.68
SHOX2-204ENST00000483851 MAP1LC3CQ9BXW4 147 aa19.28■□□□□ 0.68
SHOX2-204ENST00000483851 TIMM8BQ9Y5J9 83 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-204ENST00000483851 NPYP01303 97 aa19.27■□□□□ 0.68
SHOX2-204ENST00000483851 EVI2AP22794 236 aa19.27■□□□□ 0.68
SHOX2-204ENST00000483851 Q8N1Y9 231 aa19.27■□□□□ 0.68
SHOX2-204ENST00000483851 M0R381 172 aa19.26■□□□□ 0.67
SHOX2-204ENST00000483851 IGLL1P15814 213 aa19.26■□□□□ 0.67
SHOX2-204ENST00000483851 FXYD7P58549 80 aa19.26■□□□□ 0.67
SHOX2-204ENST00000483851 SMKR1H3BMG3 65 aa19.26■□□□□ 0.67
SHOX2-204ENST00000483851 INSP01308 110 aa19.26■□□□□ 0.67
SHOX2-204ENST00000483851 C19orf73Q9NVV2 129 aa19.26■□□□□ 0.67
SHOX2-204ENST00000483851 MAST4O15021 2626 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 362.7 ms