RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
MRPL28-210ENST00000483764 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
MRPL28-210ENST00000483764 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
MRPL28-210ENST00000483764 ZNF80P51504 273 aaPredicted RBP12.81□□□□□ -0.36
MRPL28-210ENST00000483764 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
MRPL28-210ENST00000483764 TWIST1Q15672 202 aa12.81□□□□□ -0.36
MRPL28-210ENST00000483764 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
MRPL28-210ENST00000483764 WFDC9Q8NEX5 89 aa12.81□□□□□ -0.36
MRPL28-210ENST00000483764 OR10J6PQ8NGY7 276 aa12.81□□□□□ -0.36
MRPL28-210ENST00000483764 SPATA3Q8NHX4 192 aa12.81□□□□□ -0.36
MRPL28-210ENST00000483764 IGHV4-4A0A075B6R2 117 aa12.8□□□□□ -0.36
MRPL28-210ENST00000483764 HSBP1L1C9JCN9 74 aa12.8□□□□□ -0.36
MRPL28-210ENST00000483764 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
MRPL28-210ENST00000483764 ZNF738Q8NE65 137 aa12.8□□□□□ -0.36
MRPL28-210ENST00000483764 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
MRPL28-210ENST00000483764 STAB1Q9NY15 2570 aa12.8□□□□□ -0.36
MRPL28-210ENST00000483764 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
MRPL28-210ENST00000483764 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
MRPL28-210ENST00000483764 INSL3P51460 131 aa12.79□□□□□ -0.36
MRPL28-210ENST00000483764 TDRG1Q3Y452 100 aa12.79□□□□□ -0.36
MRPL28-210ENST00000483764 SNHG12Q9BXW3 62 aa12.79□□□□□ -0.36
MRPL28-210ENST00000483764 MRPS16Q9Y3D3 137 aaKnown RBP12.79□□□□□ -0.36
MRPL28-210ENST00000483764 VWFP04275 2813 aa12.79□□□□□ -0.36
MRPL28-210ENST00000483764 TMSB15BA0A087X1C1 80 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 LINC01546A6NGU7 62 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 D6R8Y8 96 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 CKS2P33552 79 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 ERCC8Q13216 396 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
MRPL28-210ENST00000483764 C9orf66Q5T8R8 295 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 MCRIP2Q9BUT9 160 aaKnown RBP12.78□□□□□ -0.36
MRPL28-210ENST00000483764 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
MRPL28-210ENST00000483764 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 MDFIQ99750 246 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 MAP1LC3AQ9H492 121 aa12.78□□□□□ -0.36
MRPL28-210ENST00000483764 NXT2Q9NPJ8 142 aaKnown RBP12.78□□□□□ -0.36
MRPL28-210ENST00000483764 ZNF256Q9Y2P7 627 aaPredicted RBP12.78□□□□□ -0.36
MRPL28-210ENST00000483764 SNAI2O43623 268 aa12.77□□□□□ -0.37
MRPL28-210ENST00000483764 HNRNPA3P51991 378 aaKnown RBP12.77□□□□□ -0.37
MRPL28-210ENST00000483764 AMN1Q8IY45 258 aa12.77□□□□□ -0.37
MRPL28-210ENST00000483764 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
MRPL28-210ENST00000483764 LINC01545Q5VT33 79 aa12.76□□□□□ -0.37
MRPL28-210ENST00000483764 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
MRPL28-210ENST00000483764 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
MRPL28-210ENST00000483764 DEFB1P60022 68 aa12.75□□□□□ -0.37
MRPL28-210ENST00000483764 Q6ZN92 141 aa12.75□□□□□ -0.37
MRPL28-210ENST00000483764 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
MRPL28-210ENST00000483764 PMCHL2Q9BQD1 86 aa12.75□□□□□ -0.37
MRPL28-210ENST00000483764 PRSS47A8MTI9 375 aa12.74□□□□□ -0.37
MRPL28-210ENST00000483764 F6UB75 175 aa12.74□□□□□ -0.37
MRPL28-210ENST00000483764 EREGO14944 169 aa12.74□□□□□ -0.37
MRPL28-210ENST00000483764 HBDP02042 147 aa12.74□□□□□ -0.37
MRPL28-210ENST00000483764 DEFB131AP59861 70 aa12.74□□□□□ -0.37
MRPL28-210ENST00000483764 IGKV3D-20A0A0C4DH25 116 aa12.73□□□□□ -0.37
MRPL28-210ENST00000483764 A0A1B0GV90 55 aa12.73□□□□□ -0.37
MRPL28-210ENST00000483764 IGLL1P15814 213 aa12.73□□□□□ -0.37
MRPL28-210ENST00000483764 COL5A1-AS1Q5SY13 56 aa12.73□□□□□ -0.37
MRPL28-210ENST00000483764 ZNF575Q86XF7 245 aa12.73□□□□□ -0.37
MRPL28-210ENST00000483764 IFI27P40305 119 aaPredicted RBP12.72□□□□□ -0.37
MRPL28-210ENST00000483764 BEAN1Q3B7T3 259 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 MAP6D1Q9H9H5 199 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 CMC4P56277 68 aaPredicted RBP12.72□□□□□ -0.37
MRPL28-210ENST00000483764 LGALS9BQ3B8N2 356 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 LGALS9CQ6DKI2 356 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
MRPL28-210ENST00000483764 A0A0J9YX75 114 aa12.71□□□□□ -0.38
MRPL28-210ENST00000483764 TSPOP30536 169 aa12.71□□□□□ -0.38
MRPL28-210ENST00000483764 ODF3L2Q3SX64 289 aa12.71□□□□□ -0.38
MRPL28-210ENST00000483764 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.38
MRPL28-210ENST00000483764 K7EMI3 77 aa12.7□□□□□ -0.38
MRPL28-210ENST00000483764 PPP1R17O96001 155 aa12.7□□□□□ -0.38
MRPL28-210ENST00000483764 TRRAPQ9Y4A5 3859 aa12.7□□□□□ -0.38
MRPL28-210ENST00000483764 OR11H12B2RN74 326 aa12.69□□□□□ -0.38
MRPL28-210ENST00000483764 WIPF1O43516 503 aa12.69□□□□□ -0.38
MRPL28-210ENST00000483764 DUSP14O95147 198 aaKnown RBP12.69□□□□□ -0.38
MRPL28-210ENST00000483764 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
MRPL28-210ENST00000483764 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
MRPL28-210ENST00000483764 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
MRPL28-210ENST00000483764 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 NPYP01303 97 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 CD7P09564 240 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 ASIPP42127 132 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 Q8N8P6 123 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 FAM110AQ9BQ89 295 aa12.68□□□□□ -0.38
MRPL28-210ENST00000483764 FCER1GP30273 86 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 ZNF124Q15973 351 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 SLC25A34Q6PIV7 304 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 ATOH7Q8N100 152 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 SORL1Q92673 2214 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 TCAPO15273 167 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
MRPL28-210ENST00000483764 NOTCH3Q9UM47 2321 aa12.66□□□□□ -0.38
MRPL28-210ENST00000483764 LOC389332A0A1B0GUA5 103 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms