RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
NSMCE4A-210ENST00000483541 C5orf56Q8N8D9 126 aa0.64□□□□□ -2.31
NSMCE4A-210ENST00000483541 LINC00208Q96KT6 92 aa0.64□□□□□ -2.31
NSMCE4A-210ENST00000483541 SMIM3Q9BZL3 60 aa0.64□□□□□ -2.31
NSMCE4A-210ENST00000483541 SYNJ1O43426 1573 aa0.64□□□□□ -2.31
NSMCE4A-210ENST00000483541 CASZ1Q86V15 1759 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 ZNF142P52746 1687 aaPredicted RBP0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 MED13LQ71F56 2210 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 J3QR89 54 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 CCKP06307 115 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 HIST1H1AQ02539 215 aaPredicted RBP0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 ZNF56Q15929 161 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 DYNLRB2Q8TF09 96 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 MAFIPQ8WZ33 124 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 LSM2Q9Y333 95 aaKnown RBP0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 MAP2P11137 1827 aaKnown RBP0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 KIF13AQ9H1H9 1805 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 DISP2A7MBM2 1401 aa0.63□□□□□ -2.31
NSMCE4A-210ENST00000483541 A0A0D9SG42 100 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 TEX49A0A1B0GTD5 131 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 M0R2Z0 102 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 LY6G6CO95867 125 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 KLKP1Q107X0 134 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 SMCO1Q147U7 214 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 ATP11AUNQ6ZP68 121 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 PPP1R1CQ8WVI7 109 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 C10orf95Q9H7T3 257 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 COPZ2Q9P299 210 aa0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 ASH1LQ9NR48 2969 aaKnown RBP0.62□□□□□ -2.31
NSMCE4A-210ENST00000483541 RBBP6Q7Z6E9 1792 aaKnown RBP0.61□□□□□ -2.31
NSMCE4A-210ENST00000483541 LOC105371267A0A1B0GV96 52 aa0.61□□□□□ -2.31
NSMCE4A-210ENST00000483541 M0R2P5 195 aa0.61□□□□□ -2.31
NSMCE4A-210ENST00000483541 ERCC6Q03468 1493 aa0.61□□□□□ -2.31
NSMCE4A-210ENST00000483541 CACNA1EQ15878 2313 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 TRBV20-1A0A075B6N2 111 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 TCRBV3S1A0A5B6 114 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 NCR2O95944 276 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 RPL37P61927 97 aaKnown RBP0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 CTAGE3PQ8IX95 158 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 TSTD1Q8NFU3 115 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 DSCR8Q96T75 97 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 TMEM14BQ9NUH8 114 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 COA4Q9NYJ1 87 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 ERG28Q9UKR5 140 aa0.6□□□□□ -2.31
NSMCE4A-210ENST00000483541 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 CPDO75976 1380 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 PLXNA1Q9UIW2 1896 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 PRG4Q92954 1404 aaPredicted RBP0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 F5P12259 2224 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 CXorf51AA0A1B0GTR3 108 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 ZNF670-ZNF695F2Z2N8 137 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 CCDC179H3BU77 68 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 K7ERU9 68 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 TFF1P04155 84 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 IGLC6P0CF74 106 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 MPC1LP0DKB6 136 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 SMIM21Q3B7S5 101 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 CYP2G1PQ6ZSU1 146 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 NDUFA11Q86Y39 141 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 TMEM141Q96I45 108 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 SAR1AQ9NR31 198 aa0.59□□□□□ -2.31
NSMCE4A-210ENST00000483541 JMJD1CQ15652 2540 aa0.59□□□□□ -2.32
NSMCE4A-210ENST00000483541 KCPQ6ZWJ8 1503 aa0.59□□□□□ -2.32
NSMCE4A-210ENST00000483541 TRAV12-2A0A075B6T6 113 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 FAM236AA0A1B0GUQ0 79 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 FAM236BA0A1B0GV22 79 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 TSPAN19P0C672 248 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 SLC25A6P12236 298 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 COX4I1P13073 169 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 SPINK7P58062 85 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 PTPRMP28827 1452 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 MYO7AQ13402 2215 aa0.58□□□□□ -2.32
NSMCE4A-210ENST00000483541 MYH9P35579 1960 aaKnown RBP0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 PARP14Q460N5 1801 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 SPEF2Q9C093 1822 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 M0R129 80 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 PYYP10082 97 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 VSTM2AQ8TAG5 236 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 PFDN5Q99471 154 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 FAM103A1Q9BTL3 118 aaKnown RBP0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 BET1LQ9NYM9 111 aa0.57□□□□□ -2.32
NSMCE4A-210ENST00000483541 TANC1Q9C0D5 1861 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 AKAP11Q9UKA4 1901 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 LINC00694P0DN24 101 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 LINC01545Q5VT33 79 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 OR2T2Q6IF00 324 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 IFI27L1Q96BM0 104 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 PSMG3Q9BT73 122 aaPredicted RBP0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 TPT1P8Q9HAU6 139 aa0.56□□□□□ -2.32
NSMCE4A-210ENST00000483541 LAMB1P07942 1786 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 PHIPQ8WWQ0 1821 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 NAV2Q8IVL1 2488 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 ADGRB1O14514 1584 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 MCRIP1C9JLW8 97 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 SPANXN1Q5VSR9 72 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 MIC13Q5XKP0 118 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 PLAC8Q9NZF1 115 aa0.55□□□□□ -2.32
NSMCE4A-210ENST00000483541 PAIP2BQ9ULR5 123 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms