RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 DEFB131BA0A096LNP1 70 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 IGHV3-53P01767 116 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 ZNF876PQ49A33 203 aa12.63□□□□□ -0.39
CPNE1-224ENST00000483359 RPP21Q9H633 154 aaKnown RBP12.63□□□□□ -0.39
CPNE1-224ENST00000483359 TRAV10A0A0B4J240 114 aa12.62□□□□□ -0.39
CPNE1-224ENST00000483359 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
CPNE1-224ENST00000483359 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
CPNE1-224ENST00000483359 SSTP61278 116 aa12.62□□□□□ -0.39
CPNE1-224ENST00000483359 MUC4Q99102 2169 aa12.62□□□□□ -0.39
CPNE1-224ENST00000483359 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
CPNE1-224ENST00000483359 PHLDA3Q9Y5J5 127 aa12.61□□□□□ -0.39
CPNE1-224ENST00000483359 ATP5G1P05496 136 aa12.61□□□□□ -0.39
CPNE1-224ENST00000483359 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
CPNE1-224ENST00000483359 RASL10AQ92737 203 aa12.61□□□□□ -0.39
CPNE1-224ENST00000483359 F5H768 121 aa12.6□□□□□ -0.39
CPNE1-224ENST00000483359 M0R381 172 aa12.6□□□□□ -0.39
CPNE1-224ENST00000483359 GATCO43716 136 aaKnown RBP12.6□□□□□ -0.39
CPNE1-224ENST00000483359 ADCYAP1P18509 176 aa12.6□□□□□ -0.39
CPNE1-224ENST00000483359 CASC10Q5T4H9 136 aa12.6□□□□□ -0.39
CPNE1-224ENST00000483359 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
CPNE1-224ENST00000483359 NUPR2A6NF83 97 aa12.6□□□□□ -0.39
CPNE1-224ENST00000483359 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
CPNE1-224ENST00000483359 CEMP1Q6PRD7 247 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-224ENST00000483359 TMEM218A2RU14 115 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 XKRY2A2RUG3 117 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 CXCL1P09341 107 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 OR10AG1Q8NH19 301 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 SFRP2Q96HF1 295 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 SCRT2Q9NQ03 307 aa12.59□□□□□ -0.39
CPNE1-224ENST00000483359 F8W036 122 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 C3orf84H3BNL1 204 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 IGLL5B9A064 214 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 HOXA5P20719 270 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
CPNE1-224ENST00000483359 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
CPNE1-224ENST00000483359 JPT2Q9H910 190 aa12.57□□□□□ -0.4
CPNE1-224ENST00000483359 OSTCQ9NRP0 149 aa12.57□□□□□ -0.4
CPNE1-224ENST00000483359 SNAI2O43623 268 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 ZFP82Q8N141 532 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 SYT8Q8NBV8 401 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 C18orf15Q96N68 181 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 DYNC2H1Q8NCM8 4307 aaKnown RBP12.56□□□□□ -0.4
CPNE1-224ENST00000483359 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 OR10G8Q8NGN5 311 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
CPNE1-224ENST00000483359 SSBP4Q9BWG4 385 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-224ENST00000483359 PLECQ15149 4684 aaKnown RBP12.55□□□□□ -0.4
CPNE1-224ENST00000483359 CFAP126Q5VTH2 177 aa12.55□□□□□ -0.4
CPNE1-224ENST00000483359 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
CPNE1-224ENST00000483359 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
CPNE1-224ENST00000483359 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-224ENST00000483359 V9GYV3 84 aa12.55□□□□□ -0.4
CPNE1-224ENST00000483359 TENM2Q9NT68 2774 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 IGHV4-4A0A075B6R2 117 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 A0A0J9YY99 117 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 A8MWL6 223 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 CT83Q5H943 113 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
CPNE1-224ENST00000483359 TMA7Q9Y2S6 64 aaKnown RBP12.54□□□□□ -0.4
CPNE1-224ENST00000483359 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 A0A087WWL8 130 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 PNRC1Q12796 327 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-224ENST00000483359 PTH2Q96A98 100 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 SAMD10Q9BYL1 202 aa12.53□□□□□ -0.4
CPNE1-224ENST00000483359 RS1O15537 224 aa12.52□□□□□ -0.4
CPNE1-224ENST00000483359 SEC11CQ9BY50 192 aa12.52□□□□□ -0.4
CPNE1-224ENST00000483359 A8MWV9 139 aa12.52□□□□□ -0.41
CPNE1-224ENST00000483359 FHL2Q14192 279 aa12.52□□□□□ -0.41
CPNE1-224ENST00000483359 TSKUQ8WUA8 353 aa12.52□□□□□ -0.41
CPNE1-224ENST00000483359 PGLYRP4Q96LB8 373 aa12.52□□□□□ -0.41
CPNE1-224ENST00000483359 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
CPNE1-224ENST00000483359 LOC105371267A0A1B0GV96 52 aa12.51□□□□□ -0.41
CPNE1-224ENST00000483359 NXPH4O95158 308 aa12.51□□□□□ -0.41
CPNE1-224ENST00000483359 CTRLP40313 264 aa12.51□□□□□ -0.41
CPNE1-224ENST00000483359 NDUFAF3Q9BU61 184 aa12.51□□□□□ -0.41
CPNE1-224ENST00000483359 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
CPNE1-224ENST00000483359 F2Z2F3 143 aa12.5□□□□□ -0.41
CPNE1-224ENST00000483359 RNF212Q495C1 297 aa12.5□□□□□ -0.41
CPNE1-224ENST00000483359 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
CPNE1-224ENST00000483359 NTF3P20783 257 aa12.49□□□□□ -0.41
CPNE1-224ENST00000483359 HHLA3Q9XRX5 114 aa12.49□□□□□ -0.41
CPNE1-224ENST00000483359 LYSTQ99698 3801 aa12.49□□□□□ -0.41
CPNE1-224ENST00000483359 CACNG7P62955 275 aa12.49□□□□□ -0.41
CPNE1-224ENST00000483359 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-224ENST00000483359 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
CPNE1-224ENST00000483359 NUDT3O95989 172 aa12.48□□□□□ -0.41
CPNE1-224ENST00000483359 TWIST1Q15672 202 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms