RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MDFICQ9P1T7 246 aa14.26□□□□□ -0.13
TRAPPC12-220ENST00000482645 HIGD1CA8MV81 97 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 ZNF415Q09FC8 603 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 TMEM88Q6PEY1 159 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 FER1L6-AS1Q8NA97 138 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 GFRA4Q9GZZ7 299 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 URGCP-MRPS24S4R325 110 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 SMIM27A0A1W2PRY6 76 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 CXorf65A6NEN9 183 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 IGLC6P0CF74 106 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 SPART-AS1P0CW21 52 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 NANOS2P60321 138 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 C11orf72Q8NBR9 251 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 PGLYRP4Q96LB8 373 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 NAT8BQ9UHF3 227 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 DNAH7Q8WXX0 4024 aa14.25□□□□□ -0.13
TRAPPC12-220ENST00000482645 MUC21A0A0G2JKD1 596 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 MUC21A0A140T8X8 626 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 ARMS2P0C7Q2 107 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 RNASE3P12724 160 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 FAM3BP58499 235 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 KCNIP4Q6PIL6 250 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 IL17DQ8TAD2 202 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 WWC2-AS2Q96NR7 200 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 DKK2Q9UBU2 259 aa14.24□□□□□ -0.13
TRAPPC12-220ENST00000482645 S100PP25815 95 aa14.23□□□□□ -0.13
TRAPPC12-220ENST00000482645 A0A1W2PPQ1 181 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 FAM231BA6NCW3 169 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 DEFB130BP0DP73 79 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 DEFB130AP0DP74 79 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 CTRLP40313 264 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 SSTP61278 116 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 DNLZQ5SXM8 178 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 NUP35Q8NFH5 326 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 IMMP2LQ96T52 175 aa14.22□□□□□ -0.13
TRAPPC12-220ENST00000482645 SPINK4O60575 86 aa14.21□□□□□ -0.13
TRAPPC12-220ENST00000482645 MED14OSP0DP75 135 aa14.21□□□□□ -0.13
TRAPPC12-220ENST00000482645 OR10AG1Q8NH19 301 aa14.21□□□□□ -0.13
TRAPPC12-220ENST00000482645 C9orf85Q96MD7 179 aa14.21□□□□□ -0.13
TRAPPC12-220ENST00000482645 SMCO4Q9NRQ5 59 aa14.21□□□□□ -0.13
TRAPPC12-220ENST00000482645 LYRM9A8MSI8 78 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 SNAI2O43623 268 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 BORCS7Q96B45 105 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 PHLDA3Q9Y5J5 127 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 TRGV1A0A0A0MS02 117 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 TEX48A0A1B0GUV7 120 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 OR5AL1P0C617 328 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 DAD1P61803 113 aa14.2□□□□□ -0.14
TRAPPC12-220ENST00000482645 MUC4Q99102 2169 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 GAGE12BA1L429 117 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 M0R381 172 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 GAGE7O76087 117 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 GAGE12FP0CL80 117 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 GAGE12GP0CL81 117 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 GAGE12IP0CL82 117 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 FOXA3P55318 350 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 DAZ2Q13117 558 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 C12orf74Q32Q52 190 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 Q6ZTC4 211 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 Q6ZTI0 123 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 SCRT2Q9NQ03 307 aa14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 MRPL16Q9NX20 251 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-220ENST00000482645 F2Z2F3 143 aa14.18□□□□□ -0.14
TRAPPC12-220ENST00000482645 SPANXN1Q5VSR9 72 aa14.18□□□□□ -0.14
TRAPPC12-220ENST00000482645 MRPL54Q6P161 138 aaKnown RBP14.18□□□□□ -0.14
TRAPPC12-220ENST00000482645 SSBP4Q9BWG4 385 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC12-220ENST00000482645 A0A1B0GUT8 65 aa14.16□□□□□ -0.14
TRAPPC12-220ENST00000482645 ELOBQ15370 118 aa14.16□□□□□ -0.14
TRAPPC12-220ENST00000482645 ZFP82Q8N141 532 aa14.16□□□□□ -0.14
TRAPPC12-220ENST00000482645 MUC7Q8TAX7 377 aa14.16□□□□□ -0.14
TRAPPC12-220ENST00000482645 BTF3L4Q96K17 158 aa14.16□□□□□ -0.14
TRAPPC12-220ENST00000482645 TGIF2-C20orf24A0A0A6YYL0 155 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 HTN3P15516 51 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 CACNG7P62955 275 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 TWIST1Q15672 202 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 ZFAND6Q6FIF0 208 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 SPXQ9BT56 116 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 TRGV2A0A075B6R0 118 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 TRAV9-1A0A075B6T8 112 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 M0R2P5 195 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 SYT8Q8NBV8 401 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 CNFNQ9BYD5 112 aa14.15□□□□□ -0.14
TRAPPC12-220ENST00000482645 NXPH4O95158 308 aa14.14□□□□□ -0.15
TRAPPC12-220ENST00000482645 RIGQ13278 110 aa14.14□□□□□ -0.15
TRAPPC12-220ENST00000482645 ZNF876PQ49A33 203 aa14.14□□□□□ -0.15
TRAPPC12-220ENST00000482645 YPEL4Q96NS1 127 aa14.14□□□□□ -0.15
TRAPPC12-220ENST00000482645 MSRB1Q9NZV6 116 aa14.14□□□□□ -0.15
TRAPPC12-220ENST00000482645 NTF3P20783 257 aa14.13□□□□□ -0.15
TRAPPC12-220ENST00000482645 CAMPP49913 170 aa14.13□□□□□ -0.15
TRAPPC12-220ENST00000482645 LGALS9BQ3B8N2 356 aa14.13□□□□□ -0.15
TRAPPC12-220ENST00000482645 DMRTA1Q5VZB9 504 aa14.13□□□□□ -0.15
TRAPPC12-220ENST00000482645 ATP5L2Q7Z4Y8 100 aa14.13□□□□□ -0.15
TRAPPC12-220ENST00000482645 PHLDA1Q8WV24 401 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC12-220ENST00000482645 HBBP68871 147 aa14.12□□□□□ -0.15
TRAPPC12-220ENST00000482645 CSMD3Q7Z407 3707 aa14.12□□□□□ -0.15
TRAPPC12-220ENST00000482645 LINC00612Q8N6U2 182 aa14.11□□□□□ -0.15
TRAPPC12-220ENST00000482645 IGHV4-4A0A075B6R2 117 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 DEFB131BA0A096LNP1 70 aa14.1□□□□□ -0.15
TRAPPC12-220ENST00000482645 A0A1B0GXF2 115 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms