RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 NHLRC4P0CG21 123 aaPredicted RBP12.85□□□□□ -0.35
SH3D21-203ENST00000480549 IGHV4-31P0DP07 118 aa12.85□□□□□ -0.35
SH3D21-203ENST00000480549 CEND1Q8N111 149 aa12.85□□□□□ -0.35
SH3D21-203ENST00000480549 PTH2Q96A98 100 aa12.85□□□□□ -0.35
SH3D21-203ENST00000480549 NBPF19A0A087WUL8 3843 aa12.85□□□□□ -0.35
SH3D21-203ENST00000480549 LRRC75A-AS1Q8N1F1 130 aa12.85□□□□□ -0.35
SH3D21-203ENST00000480549 U3KQE9 123 aa12.85□□□□□ -0.35
SH3D21-203ENST00000480549 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 IGFL4Q6B9Z1 124 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 USP9YO00507 2555 aaPredicted RBP12.84□□□□□ -0.35
SH3D21-203ENST00000480549 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 FSHBP01225 129 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 CFHR3Q02985 330 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 KIR2DL4Q99706 377 aa12.84□□□□□ -0.35
SH3D21-203ENST00000480549 TRBV12-3P01733 135 aa12.83□□□□□ -0.35
SH3D21-203ENST00000480549 CRIP1P50238 77 aa12.83□□□□□ -0.35
SH3D21-203ENST00000480549 PTPN13Q12923 2485 aa12.83□□□□□ -0.35
SH3D21-203ENST00000480549 KLK15Q9H2R5 256 aa12.83□□□□□ -0.35
SH3D21-203ENST00000480549 IGKV2-40A0A087WW87 121 aaPredicted RBP12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GAGE12JA6NER3 117 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GAGE7O76087 117 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 IGKV2D-40P01614 121 aaPredicted RBP12.83□□□□□ -0.36
SH3D21-203ENST00000480549 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GAGE12IP0CL82 117 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GAGE4Q13068 117 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 TRBV25-1A0A075B6N4 114 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 C8orf49Q96NF6 230 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 METTL26Q96S19 204 aa12.83□□□□□ -0.36
SH3D21-203ENST00000480549 IGHV3OR16-13A0A075B7E8 117 aa12.82□□□□□ -0.36
SH3D21-203ENST00000480549 IGHV3-74A0A0B4J1X5 117 aa12.82□□□□□ -0.36
SH3D21-203ENST00000480549 KRTAP1-3Q8IUG1 177 aa12.82□□□□□ -0.36
SH3D21-203ENST00000480549 USMG5Q96IX5 58 aa12.82□□□□□ -0.36
SH3D21-203ENST00000480549 TPPP3Q9BW30 176 aa12.82□□□□□ -0.36
SH3D21-203ENST00000480549 CSPG4Q6UVK1 2322 aa12.82□□□□□ -0.36
SH3D21-203ENST00000480549 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
SH3D21-203ENST00000480549 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
SH3D21-203ENST00000480549 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
SH3D21-203ENST00000480549 IFI27L1Q96BM0 104 aa12.81□□□□□ -0.36
SH3D21-203ENST00000480549 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
SH3D21-203ENST00000480549 AGRNO00468 2067 aa12.81□□□□□ -0.36
SH3D21-203ENST00000480549 APCP25054 2843 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 COX8CQ7Z4L0 72 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 ABCA12Q86UK0 2595 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 PF4V1P10720 104 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 UNQ9165/PRO28630Q6UXU0 137 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 HIGD1BQ9P298 99 aa12.8□□□□□ -0.36
SH3D21-203ENST00000480549 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 ARMS2P0C7Q2 107 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
SH3D21-203ENST00000480549 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 RAX2Q96IS3 184 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
SH3D21-203ENST00000480549 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 Q96MF0 132 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 PRR25Q96S07 402 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
SH3D21-203ENST00000480549 M0QXV9 152 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 NDUFA4O00483 81 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 PPDPFQ9H3Y8 114 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 KMT2BQ9UMN6 2715 aaPredicted RBP12.78□□□□□ -0.36
SH3D21-203ENST00000480549 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 PRAC2D3DTV9 90 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 HAX1O00165 279 aa12.78□□□□□ -0.36
SH3D21-203ENST00000480549 Q8TAT8 98 aa12.77□□□□□ -0.36
SH3D21-203ENST00000480549 CFAP126Q5VTH2 177 aa12.77□□□□□ -0.37
SH3D21-203ENST00000480549 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
SH3D21-203ENST00000480549 HIST1H4GQ99525 98 aa12.77□□□□□ -0.37
SH3D21-203ENST00000480549 HBDP02042 147 aa12.77□□□□□ -0.37
SH3D21-203ENST00000480549 PSMB2P49721 201 aa12.77□□□□□ -0.37
SH3D21-203ENST00000480549 A0A087WX48 190 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 A0A1B0GUT8 65 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 NDUFV3P56181 108 aaKnown RBP12.76□□□□□ -0.37
SH3D21-203ENST00000480549 Q6YL49 198 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 ATP6V0E2Q8NHE4 81 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 D6R8Y8 96 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
SH3D21-203ENST00000480549 SH2D1AO60880 128 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 TTC32Q5I0X7 151 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 VPREB3Q9UKI3 123 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 PSMB8P28062 276 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
SH3D21-203ENST00000480549 GAGE2BQ13066 116 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 ERCC8Q13216 396 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 GAGE2EQ4V326 116 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 GAGE2DQ9UEU5 116 aa12.75□□□□□ -0.37
SH3D21-203ENST00000480549 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
SH3D21-203ENST00000480549 CHD6Q8TD26 2715 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms