RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ZNF415Q09FC8 603 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 RIGQ13278 110 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 RRN3P1Q2M238 152 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 WDR73Q6P4I2 378 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 C11orf72Q8NBR9 251 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 RNF183Q96D59 192 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 PHLDA3Q9Y5J5 127 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 DNAH3Q8TD57 4116 aa12.7□□□□□ -0.38
UPF3A-206ENST00000480362 NTF3P20783 257 aa12.69□□□□□ -0.38
UPF3A-206ENST00000480362 CACNG7P62955 275 aa12.69□□□□□ -0.38
UPF3A-206ENST00000480362 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
UPF3A-206ENST00000480362 ATP5L2Q7Z4Y8 100 aa12.69□□□□□ -0.38
UPF3A-206ENST00000480362 TMEM263Q8WUH6 116 aaKnown RBP12.69□□□□□ -0.38
UPF3A-206ENST00000480362 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
UPF3A-206ENST00000480362 X6R8D5 127 aa12.69□□□□□ -0.38
UPF3A-206ENST00000480362 A0A1B0GXF2 115 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 CAMPP49913 170 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 TWIST1Q15672 202 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 ZNF493Q6ZR52 646 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 OR11H2Q8NH07 326 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
UPF3A-206ENST00000480362 C16orf74Q96GX8 76 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
UPF3A-206ENST00000480362 IGHV4-4A0A075B6R2 117 aa12.67□□□□□ -0.38
UPF3A-206ENST00000480362 M0R381 172 aa12.67□□□□□ -0.38
UPF3A-206ENST00000480362 RAB5AP20339 215 aa12.67□□□□□ -0.38
UPF3A-206ENST00000480362 HBBP68871 147 aa12.67□□□□□ -0.38
UPF3A-206ENST00000480362 A0A1B0GW15 77 aa12.66□□□□□ -0.38
UPF3A-206ENST00000480362 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
UPF3A-206ENST00000480362 RASL11AQ6T310 242 aa12.66□□□□□ -0.38
UPF3A-206ENST00000480362 ZFP82Q8N141 532 aa12.66□□□□□ -0.38
UPF3A-206ENST00000480362 SPXQ9BT56 116 aa12.66□□□□□ -0.38
UPF3A-206ENST00000480362 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
UPF3A-206ENST00000480362 RAB4BP61018 213 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 COX19Q49B96 90 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 SYT8Q8NBV8 401 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 IL17DQ8TAD2 202 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 TP53TG1Q9Y2A0 90 aa12.65□□□□□ -0.38
UPF3A-206ENST00000480362 PLAC8L1A1L4L8 177 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 M0R2P5 195 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 NXPH4O95158 308 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 S100A8P05109 93 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 ZNF876PQ49A33 203 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 TMEM136Q6ZRR5 245 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 RETNQ9HD89 108 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 MUC4Q99102 2169 aa12.64□□□□□ -0.39
UPF3A-206ENST00000480362 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
UPF3A-206ENST00000480362 PTH2Q96A98 100 aa12.63□□□□□ -0.39
UPF3A-206ENST00000480362 GNB1LQ9BYB4 327 aa12.63□□□□□ -0.39
UPF3A-206ENST00000480362 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
UPF3A-206ENST00000480362 MIFP14174 115 aa12.62□□□□□ -0.39
UPF3A-206ENST00000480362 EMP1P54849 157 aa12.62□□□□□ -0.39
UPF3A-206ENST00000480362 DAZ2Q13117 558 aaKnown RBP12.62□□□□□ -0.39
UPF3A-206ENST00000480362 GATD1Q8NB37 220 aa12.62□□□□□ -0.39
UPF3A-206ENST00000480362 MRPL16Q9NX20 251 aaKnown RBP12.62□□□□□ -0.39
UPF3A-206ENST00000480362 TRAPPC1Q9Y5R8 145 aa12.62□□□□□ -0.39
UPF3A-206ENST00000480362 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 TRGC1P0CF51 173 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 EVI2AP22794 236 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 TMEM191AQ9H0A3 160 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 JPT2Q9H910 190 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 MGAM2Q2M2H8 2515 aa12.61□□□□□ -0.39
UPF3A-206ENST00000480362 TRGV1A0A0A0MS02 117 aa12.6□□□□□ -0.39
UPF3A-206ENST00000480362 HLA-DQA1P01909 254 aa12.6□□□□□ -0.39
UPF3A-206ENST00000480362 Q8NAQ8 132 aa12.6□□□□□ -0.39
UPF3A-206ENST00000480362 RASL10AQ92737 203 aa12.6□□□□□ -0.39
UPF3A-206ENST00000480362 MRPL18Q9H0U6 180 aaKnown RBP12.6□□□□□ -0.39
UPF3A-206ENST00000480362 DEFB4AO15263 64 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 MT-ND6P03923 174 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 TRGC2P03986 189 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 FABP9Q0Z7S8 132 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 PIK3CD-AS1Q5SR53 167 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
UPF3A-206ENST00000480362 FRZBQ92765 325 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 AP1S3Q96PC3 154 aa12.59□□□□□ -0.39
UPF3A-206ENST00000480362 APCSP02743 223 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 FAM104BQ5XKR9 115 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 Q6ZTI0 123 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 AMN1Q8IY45 258 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 SPATA25Q9BR10 227 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 TM2D3Q9BRN9 247 aa12.58□□□□□ -0.4
UPF3A-206ENST00000480362 NOTCH1P46531 2555 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 SMIM17P0DL12 118 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 SLAQ13239 276 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
UPF3A-206ENST00000480362 A0A087WWL8 130 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 A8MWV9 139 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 GAGE7O76087 117 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 CRYGDP07320 174 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms