RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TENM3Q9P273 2699 aa4.64□□□□□ -1.67
HERC4-210ENST00000480158 SCO1O75880 301 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 SNAPINO95295 136 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 ARMS2P0C7Q2 107 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 ASIPP42127 132 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 FAM3BP58499 235 aaPredicted RBP4.63□□□□□ -1.67
HERC4-210ENST00000480158 FAM231DQ6ZW35 169 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 TMEM256Q8N2U0 113 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 OSTCQ9NRP0 149 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 A0A087WWL8 130 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 IGHV4-28A0A0C4DH34 117 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 BTF3P20290 206 aaKnown RBP4.63□□□□□ -1.67
HERC4-210ENST00000480158 TMEM88Q6PEY1 159 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 GTSF1Q8WW33 167 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 NEU1Q99519 415 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 C20orf144Q9BQM9 153 aa4.63□□□□□ -1.67
HERC4-210ENST00000480158 NOP10Q9NPE3 64 aaKnown RBP4.63□□□□□ -1.67
HERC4-210ENST00000480158 FBN3Q75N90 2809 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 HIGD1CA8MV81 97 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 A8MWL6 223 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 M0R381 172 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 RNASE3P12724 160 aaKnown RBP4.62□□□□□ -1.67
HERC4-210ENST00000480158 TDRG1Q3Y452 100 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 LYZL1Q6UWQ5 148 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 RNASE8Q8TDE3 154 aaKnown RBP4.62□□□□□ -1.67
HERC4-210ENST00000480158 KRTAP9-2Q9BYQ4 174 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 TRGV11A0A075B6L2 103 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 XKRY2A2RUG3 117 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 SNURFLB1AK76 121 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 RHEBQ15382 184 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 CBLN2Q8IUK8 224 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 FER1L6-AS1Q8NA97 138 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 C11orf72Q8NBR9 251 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 OR10AG1Q8NH19 301 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 TSKUQ8WUA8 353 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 TMEM263Q8WUH6 116 aaKnown RBP4.62□□□□□ -1.67
HERC4-210ENST00000480158 B9D2Q9BPU9 175 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 SPATA25Q9BR10 227 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 MRPL16Q9NX20 251 aaKnown RBP4.62□□□□□ -1.67
HERC4-210ENST00000480158 PHLDA3Q9Y5J5 127 aa4.62□□□□□ -1.67
HERC4-210ENST00000480158 TRGV1A0A0A0MS02 117 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 PPP1R2P9O14990 202 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 DEFB130BP0DP73 79 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 DEFB130AP0DP74 79 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 ZNF415Q09FC8 603 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 Q8NAQ8 132 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 C16orf74Q96GX8 76 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 TM2D3Q9BRN9 247 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 MSRB1Q9NZV6 116 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 A0A1W2PPQ1 181 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 PLAC8L1A1L4L8 177 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 GAGE7O76087 117 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 S100A6P06703 90 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 GAGE12FP0CL80 117 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 GAGE12GP0CL81 117 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 GAGE12IP0CL82 117 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 RPS20P60866 119 aaKnown RBP4.61□□□□□ -1.67
HERC4-210ENST00000480158 ZNF876PQ49A33 203 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 SPANXN1Q5VSR9 72 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 MRPL54Q6P161 138 aaKnown RBP4.61□□□□□ -1.67
HERC4-210ENST00000480158 Q6ZTI0 123 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 NUP35Q8NFH5 326 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 JPT2Q9H910 190 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 IL36BQ9NZH7 164 aa4.61□□□□□ -1.67
HERC4-210ENST00000480158 SMIM27A0A1W2PRY6 76 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 SMIM9A6NGZ8 99 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 IGLC6P0CF74 106 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 MIFP14174 115 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 NTF3P20783 257 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 CAMPP49913 170 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 TWIST1Q15672 202 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 CTDSP1Q9GZU7 261 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 NAT8BQ9UHF3 227 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 CELA1Q9UNI1 258 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 TP53TG1Q9Y2A0 90 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 TGP01266 2768 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 IGHV3-73A0A0B4J1V6 119 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 IGHV3-53P01767 116 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 FOXA3P55318 350 aaPredicted RBP4.6□□□□□ -1.67
HERC4-210ENST00000480158 S100A12P80511 92 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 ZNF493Q6ZR52 646 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 LINC00467Q9BRT7 94 aa4.6□□□□□ -1.67
HERC4-210ENST00000480158 TRGV2A0A075B6R0 118 aa4.59□□□□□ -1.67
HERC4-210ENST00000480158 A0A087WWC5 75 aa4.59□□□□□ -1.67
HERC4-210ENST00000480158 S100PP25815 95 aa4.59□□□□□ -1.67
HERC4-210ENST00000480158 FAM74A4Q5TZK3 123 aa4.59□□□□□ -1.67
HERC4-210ENST00000480158 KCNIP4Q6PIL6 250 aa4.59□□□□□ -1.67
HERC4-210ENST00000480158 C9orf85Q96MD7 179 aa4.59□□□□□ -1.67
HERC4-210ENST00000480158 TGIF2-C20orf24A0A0A6YYL0 155 aa4.58□□□□□ -1.68
HERC4-210ENST00000480158 M0R2P5 195 aa4.58□□□□□ -1.68
HERC4-210ENST00000480158 OR5AL1P0C617 328 aa4.58□□□□□ -1.68
HERC4-210ENST00000480158 GYPEP15421 78 aa4.58□□□□□ -1.68
HERC4-210ENST00000480158 HTN3P15516 51 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms