RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 LINC01619G3V211 115 aa15.74■□□□□ 0.11
COL13A1-208ENST00000479733 ARL3P36405 182 aa15.74■□□□□ 0.11
COL13A1-208ENST00000479733 CARD19Q96LW7 228 aa15.74■□□□□ 0.11
COL13A1-208ENST00000479733 M0R1W7 72 aa15.74■□□□□ 0.11
COL13A1-208ENST00000479733 UBE2D1P51668 147 aa15.74■□□□□ 0.11
COL13A1-208ENST00000479733 FAM110DQ8TAY7 271 aaPredicted RBP15.74■□□□□ 0.11
COL13A1-208ENST00000479733 HRNRQ86YZ3 2850 aaPredicted RBP15.74■□□□□ 0.11
COL13A1-208ENST00000479733 C11orf86A6NJI1 115 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 Q6ZUT4 128 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 GNRH2O43555 120 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 TCL1BO95988 128 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 Q6ZS46 218 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 KIR2DL4Q99706 377 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 DPH3P1Q9H4G8 78 aa15.73■□□□□ 0.11
COL13A1-208ENST00000479733 SCGB1C2P0DMR2 95 aa15.72■□□□□ 0.11
COL13A1-208ENST00000479733 COX6B1P14854 86 aa15.71■□□□□ 0.11
COL13A1-208ENST00000479733 ZFP36P26651 326 aaKnown RBP15.71■□□□□ 0.11
COL13A1-208ENST00000479733 ANXA2RQ3ZCQ2 193 aa15.71■□□□□ 0.11
COL13A1-208ENST00000479733 CD7P09564 240 aa15.71■□□□□ 0.11
COL13A1-208ENST00000479733 RNASE4P34096 147 aaKnown RBP15.71■□□□□ 0.11
COL13A1-208ENST00000479733 NDUFA11Q86Y39 141 aa15.71■□□□□ 0.11
COL13A1-208ENST00000479733 F6UB75 175 aa15.71■□□□□ 0.1
COL13A1-208ENST00000479733 CRYGDP07320 174 aa15.71■□□□□ 0.1
COL13A1-208ENST00000479733 RPL11P62913 178 aaKnown RBP15.71■□□□□ 0.1
COL13A1-208ENST00000479733 RNF223E7ERA6 249 aa15.7■□□□□ 0.1
COL13A1-208ENST00000479733 ASIPP42127 132 aa15.7■□□□□ 0.1
COL13A1-208ENST00000479733 RPL39P62891 51 aaKnown RBP15.7■□□□□ 0.1
COL13A1-208ENST00000479733 TMEM170BQ5T4T1 132 aa15.7■□□□□ 0.1
COL13A1-208ENST00000479733 ATP6V0E2Q8NHE4 81 aa15.7■□□□□ 0.1
COL13A1-208ENST00000479733 CELSR1Q9NYQ6 3014 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 TP53TG1Q9Y2A0 90 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 UBE2D3P61077 147 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 UBE2D2P62837 147 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 IGF2-ASQ6U949 168 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 PPDPFLQ8WWR9 84 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 EEF1AKMT3Q96AZ1 226 aa15.69■□□□□ 0.1
COL13A1-208ENST00000479733 A0A0J9YY99 117 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 H7C2G1 150 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 GATA3P23771 443 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 RAX2Q96IS3 184 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 TCF15Q12870 199 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 EBI3Q14213 229 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 TEN1Q86WV5 123 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 ZFAND2AQ8N6M9 145 aa15.68■□□□□ 0.1
COL13A1-208ENST00000479733 TSHBP01222 138 aa15.67■□□□□ 0.1
COL13A1-208ENST00000479733 CFC1BP0CG36 223 aa15.67■□□□□ 0.1
COL13A1-208ENST00000479733 CFC1P0CG37 223 aa15.67■□□□□ 0.1
COL13A1-208ENST00000479733 TSPEAR-AS2P59090 65 aa15.67■□□□□ 0.1
COL13A1-208ENST00000479733 RNF183Q96D59 192 aa15.67■□□□□ 0.1
COL13A1-208ENST00000479733 JPT2Q9H910 190 aa15.67■□□□□ 0.1
COL13A1-208ENST00000479733 IGLV4-69A0A075B6H9 119 aa15.66■□□□□ 0.1
COL13A1-208ENST00000479733 TRAV21A0A0B4J279 112 aa15.66■□□□□ 0.1
COL13A1-208ENST00000479733 A8MWV9 139 aa15.66■□□□□ 0.1
COL13A1-208ENST00000479733 ANKRD29Q8N6D5 301 aa15.66■□□□□ 0.1
COL13A1-208ENST00000479733 OR10J6PQ8NGY7 276 aa15.66■□□□□ 0.1
COL13A1-208ENST00000479733 TMEM219Q86XT9 240 aa15.65■□□□□ 0.1
COL13A1-208ENST00000479733 GPHB5Q86YW7 130 aa15.65■□□□□ 0.1
COL13A1-208ENST00000479733 MRPL53Q96EL3 112 aaKnown RBP15.65■□□□□ 0.1
COL13A1-208ENST00000479733 SPTAN1Q13813 2472 aaKnown RBP15.65■□□□□ 0.1
COL13A1-208ENST00000479733 HERVK_113P61574 105 aa15.64■□□□□ 0.09
COL13A1-208ENST00000479733 UNQ9165/PRO28630Q6UXU0 137 aa15.64■□□□□ 0.09
COL13A1-208ENST00000479733 A0A087WWL8 130 aa15.64■□□□□ 0.09
COL13A1-208ENST00000479733 F5H697 171 aa15.64■□□□□ 0.09
COL13A1-208ENST00000479733 MINOS1Q5TGZ0 78 aa15.64■□□□□ 0.09
COL13A1-208ENST00000479733 MINOS1-NBL1R4GNA1 71 aa15.64■□□□□ 0.09
COL13A1-208ENST00000479733 CDSNQ15517 529 aa15.63■□□□□ 0.09
COL13A1-208ENST00000479733 COL6A6A6NMZ7 2263 aa15.63■□□□□ 0.09
COL13A1-208ENST00000479733 IGHV3-64A0A075B6Q5 118 aa15.63■□□□□ 0.09
COL13A1-208ENST00000479733 TRBV12-3P01733 135 aa15.63■□□□□ 0.09
COL13A1-208ENST00000479733 LYRM7Q5U5X0 104 aa15.63■□□□□ 0.09
COL13A1-208ENST00000479733 ATRXP46100 2492 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 IGHV3-30P01768 117 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 IGHV3-30-5P0DP03 117 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 SAA4P35542 130 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 CRIP2P52943 208 aaPredicted RBP15.62■□□□□ 0.09
COL13A1-208ENST00000479733 MUC4Q99102 2169 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 OOSP1A8MZH6 123 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 ZNF688P0C7X2 276 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 RNASE3P12724 160 aaKnown RBP15.62■□□□□ 0.09
COL13A1-208ENST00000479733 TRPT1Q86TN4 253 aaKnown RBP15.62■□□□□ 0.09
COL13A1-208ENST00000479733 ITLN2Q8WWU7 325 aaPredicted RBP15.62■□□□□ 0.09
COL13A1-208ENST00000479733 LINC00477Q96M19 166 aa15.62■□□□□ 0.09
COL13A1-208ENST00000479733 MAP1AP78559 2803 aaPredicted RBP15.62■□□□□ 0.09
COL13A1-208ENST00000479733 COL12A1Q99715 3063 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 TRBV7-1A0A0A6YYK4 115 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 SRD5A1P18405 259 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 C9orf139Q6ZV77 190 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 C10orf126Q8N4M7 172 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 U3KQE9 123 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 PMVKQ15126 192 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 ZNRF2Q8NHG8 242 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 C9JAW5 83 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 OPRPNQ99935 248 aaPredicted RBP15.61■□□□□ 0.09
COL13A1-208ENST00000479733 ANAPC13Q9BS18 74 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 PRO1854Q9UHT4 67 aa15.61■□□□□ 0.09
COL13A1-208ENST00000479733 IGHV3OR16-10A0A075B7F0 116 aa15.6■□□□□ 0.09
COL13A1-208ENST00000479733 CENPVL3A0A0U1RRI6 287 aa15.6■□□□□ 0.09
COL13A1-208ENST00000479733 IGIPA6NJ69 53 aa15.6■□□□□ 0.09
COL13A1-208ENST00000479733 TRBV20-1A0A075B6N2 111 aa15.59■□□□□ 0.09
COL13A1-208ENST00000479733 ZNF256Q9Y2P7 627 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms