RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PKD1L2Q7Z442 2459 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 M0R381 172 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 APOMO95445 188 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 DEFB1P60022 68 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 C8orf86Q6ZUL3 223 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 NFE4Q86UQ8 179 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 HOXA3O43365 443 aaPredicted RBP10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 FHL3Q13643 280 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 ZFP2Q6ZN57 461 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 RASL10AQ92737 203 aa10.11□□□□□ -0.79
PDZRN3-208ENST00000479530 CENPVL3A0A0U1RRI6 287 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 BRD3OSQ6XYD6 125 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 KLHL30-AS1Q8NEE0 82 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 FAM110DQ8TAY7 271 aaPredicted RBP10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 PRADC1Q9BSG0 188 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 PTH2Q96A98 100 aa10.1□□□□□ -0.79
PDZRN3-208ENST00000479530 GNLYP22749 145 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 ITLN2Q8WWU7 325 aaPredicted RBP10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 SLC50A1Q9BRV3 221 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 IGHV4-4A0A075B6R2 117 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 EMP1P54849 157 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 FOXI1Q12951 378 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 CFAP126Q5VTH2 177 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 C14orf178Q8N769 122 aaPredicted RBP10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 GLMPQ8WWB7 406 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 NPFFO15130 113 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
PDZRN3-208ENST00000479530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 ZNF815PA8K554 130 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 SLC25A16P16260 332 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 LOC107984156A0A0G2JMH3 177 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 GATA3P23771 443 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 ARL17AQ8IVW1 177 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
PDZRN3-208ENST00000479530 TRBV12-3P01733 135 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 IGHV4-39P01824 125 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 PSMB2P49721 201 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 ZNF418Q8TF45 676 aaPredicted RBP10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 ZANQ9Y493 2812 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 LINC01619G3V211 115 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 C5orf56Q8N8D9 126 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 C1QTNF4Q9BXJ3 329 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
PDZRN3-208ENST00000479530 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 COX6B1P14854 86 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 ORMDL2Q53FV1 153 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 HIF1ANQ9NWT6 349 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 CENPEQ02224 2701 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 CSPG4Q6UVK1 2322 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 MGPP08493 103 aa10.06□□□□□ -0.8
PDZRN3-208ENST00000479530 TGFAP01135 160 aa10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 CRYGDP07320 174 aa10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 UBE2D1P51668 147 aa10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 SRSF9Q13242 221 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 C16orf92Q96LL3 132 aa10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 IGHV4-61A0A0C4DH41 118 aa10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 DUSP14O95147 198 aaKnown RBP10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 Q6ZS46 218 aa10.05□□□□□ -0.8
PDZRN3-208ENST00000479530 CD7P09564 240 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 LY6EQ16553 131 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 METTL26Q96S19 204 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 MUC4Q99102 2169 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 TSHBP01222 138 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 HERV-K104P63124 156 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 ZFAND2AQ8N6M9 145 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 CARD19Q96LW7 228 aa10.04□□□□□ -0.8
PDZRN3-208ENST00000479530 GNRH2O43555 120 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 IGHV4-38-2P0DP08 117 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 XGP55808 180 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 POLQO75417 2590 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 C11orf86A6NJI1 115 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 F6UB75 175 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 SPINK8P0C7L1 97 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 UBE2D3P61077 147 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 UBE2D2P62837 147 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 EEF1AKMT3Q96AZ1 226 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
PDZRN3-208ENST00000479530 PHLDA3Q9Y5J5 127 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms