RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 BLNKQ8WV28 456 aa4.42□□□□□ -1.7
HOXB3-209ENST00000478644 GNPNAT1Q96EK6 184 aaPredicted RBP4.42□□□□□ -1.7
HOXB3-209ENST00000478644 LINC00477Q96M19 166 aa4.42□□□□□ -1.7
HOXB3-209ENST00000478644 PYGO2Q9BRQ0 406 aa4.42□□□□□ -1.7
HOXB3-209ENST00000478644 AGRNO00468 2067 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 TRBV7-9A0A0J9YWB2 115 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 A0A1B0GVY2 172 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 M0R2Z0 102 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 M0R3E3 92 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 ARPC5O15511 151 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 OR7C2O60412 319 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 OR10J4P0C629 311 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 CT45A10P0DMU9 189 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 HTN3P15516 51 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 GATA1P15976 413 aaPredicted RBP4.41□□□□□ -1.7
HOXB3-209ENST00000478644 UBE2G2P60604 165 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 RAB2AP61019 212 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 DAZ2Q13117 558 aaKnown RBP4.41□□□□□ -1.7
HOXB3-209ENST00000478644 ZNF345Q14585 488 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 SPINK13Q1W4C9 94 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 SAPCD1Q5SSQ6 148 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 ZNF767PQ75MW2 155 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 EXOC3-AS1Q8N2X6 119 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 URB1-AS1Q96HZ7 61 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 FAM19A4Q96LR4 140 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 C18orf15Q96N68 181 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 LINC00467Q9BRT7 94 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 MAP1LC3CQ9BXW4 147 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 CYTL1Q9NRR1 136 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
HOXB3-209ENST00000478644 FRAS1Q86XX4 4008 aa4.4□□□□□ -1.7
HOXB3-209ENST00000478644 TRAV12-2A0A075B6T6 113 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 RBAKDNA6NC62 111 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 F5H768 121 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 SMLR1H3BR10 107 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 RTL8CO15255 209 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 SLC25A5P05141 298 aaKnown RBP4.4□□□□□ -1.71
HOXB3-209ENST00000478644 DEFB130BP0DP73 79 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 DEFB130AP0DP74 79 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 CRISP2P16562 243 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 CSN1S1P47710 185 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 CDC34P49427 236 aaPredicted RBP4.4□□□□□ -1.71
HOXB3-209ENST00000478644 RANP62826 216 aaKnown RBP4.4□□□□□ -1.71
HOXB3-209ENST00000478644 UBE2L3P68036 154 aaKnown RBP4.4□□□□□ -1.71
HOXB3-209ENST00000478644 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
HOXB3-209ENST00000478644 BAP18Q8IXM2 172 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 C6orf223Q8N319 242 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 KCNRGQ8N5I3 272 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 RXFP4Q8TDU9 374 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 PHYHIPLQ96FC7 376 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 UPK3BQ9BT76 320 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 ACTR3CQ9C0K3 210 aaPredicted RBP4.4□□□□□ -1.71
HOXB3-209ENST00000478644 SH3BGRL3Q9H299 93 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 Q9H3A6 140 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 Q9HAA7 133 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 OTORQ9NRC9 128 aa4.4□□□□□ -1.71
HOXB3-209ENST00000478644 TRAV9-2A0A087WT02 112 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 A0A0D9SG52 128 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 ZNF705GA8MUZ8 300 aaPredicted RBP4.39□□□□□ -1.71
HOXB3-209ENST00000478644 KLLNB2CW77 178 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 M0R2N4 97 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 TSPAN13O95857 204 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 CXorf1O96002 111 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 PRB4P10163 310 aaPredicted RBP4.39□□□□□ -1.71
HOXB3-209ENST00000478644 ZNF138P52744 262 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 ERCC8Q13216 396 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 FAM74A1Q5RGS3 127 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 TMEM78Q5T7P6 136 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 GFI1BQ5VTD9 330 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 TCTE3Q8IZS6 198 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 LINC00612Q8N6U2 182 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 TMED6Q8WW62 240 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 ST6GAL2Q96JF0 529 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 VGLL1Q99990 258 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 ZNF492Q9P255 531 aa4.39□□□□□ -1.71
HOXB3-209ENST00000478644 IGKV2-40A0A087WW87 121 aaPredicted RBP4.38□□□□□ -1.71
HOXB3-209ENST00000478644 PLAC8L1A1L4L8 177 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 PGPA6NDG6 321 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 BCL2L11O43521 198 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 ZNF324O75467 553 aaPredicted RBP4.38□□□□□ -1.71
HOXB3-209ENST00000478644 EIF3GO75821 320 aaKnown RBP eCLIP4.38□□□□□ -1.71
HOXB3-209ENST00000478644 IGKV2D-40P01614 121 aaPredicted RBP4.38□□□□□ -1.71
HOXB3-209ENST00000478644 ARL14EPLP0DKL9 152 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 HTN1P15515 57 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 AZU1P20160 251 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 GCHFRP30047 84 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 GAGE5Q13069 117 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 GAGE6Q13070 117 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 LAGE3Q14657 143 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 ZNF726P1Q15940 193 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 C5orf47Q569G3 176 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 AKR1C8PQ5T2L2 129 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 IBA57Q5T440 356 aaKnown RBP4.38□□□□□ -1.71
HOXB3-209ENST00000478644 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 ZFAND2AQ8N6M9 145 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 ZNRF2Q8NHG8 242 aa4.38□□□□□ -1.71
HOXB3-209ENST00000478644 CMTM2Q8TAZ6 248 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms