RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 PGPEP1LA6NFU8 196 aa15.96■□□□□ 0.15
C9orf3-215ENST00000478473 LINC00315P59091 139 aa15.96■□□□□ 0.15
C9orf3-215ENST00000478473 ZNF506Q5JVG8 444 aa15.96■□□□□ 0.15
C9orf3-215ENST00000478473 IL36BQ9NZH7 164 aa15.95■□□□□ 0.14
C9orf3-215ENST00000478473 KANTRA0A1W2PQU2 76 aa15.94■□□□□ 0.14
C9orf3-215ENST00000478473 LTAP01374 205 aa15.94■□□□□ 0.14
C9orf3-215ENST00000478473 DNAH10OSP0CZ25 163 aa15.94■□□□□ 0.14
C9orf3-215ENST00000478473 EIF5AP63241 154 aaKnown RBP15.94■□□□□ 0.14
C9orf3-215ENST00000478473 SLC25A29Q8N8R3 303 aa15.94■□□□□ 0.14
C9orf3-215ENST00000478473 ZC2HC1AQ96GY0 325 aa15.94■□□□□ 0.14
C9orf3-215ENST00000478473 LOC100131303A0A0U1RQF7 123 aa15.93■□□□□ 0.14
C9orf3-215ENST00000478473 ZFP2Q6ZN57 461 aa15.93■□□□□ 0.14
C9orf3-215ENST00000478473 ZNF471Q9BX82 626 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-215ENST00000478473 LRP1BQ9NZR2 4599 aa15.92■□□□□ 0.14
C9orf3-215ENST00000478473 KRBOX1C9JBD0 128 aa15.92■□□□□ 0.14
C9orf3-215ENST00000478473 RHOHQ15669 191 aa15.92■□□□□ 0.14
C9orf3-215ENST00000478473 ZNF674Q2M3X9 581 aa15.92■□□□□ 0.14
C9orf3-215ENST00000478473 LGALSLQ3ZCW2 172 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-215ENST00000478473 SFT2D1Q8WV19 159 aa15.92■□□□□ 0.14
C9orf3-215ENST00000478473 LY96Q9Y6Y9 160 aa15.92■□□□□ 0.14
C9orf3-215ENST00000478473 TRAV9-2A0A087WT02 112 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 A8MWV9 139 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 MGST1P10620 155 aaKnown RBP15.91■□□□□ 0.14
C9orf3-215ENST00000478473 ASIPP42127 132 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 UBE2G1P62253 170 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 CST9LP1Q5W188 147 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 WFDC10BQ8IUB3 73 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 FAM213BQ8TBF2 198 aa15.91■□□□□ 0.14
C9orf3-215ENST00000478473 C16orf90A8MZG2 172 aa15.9■□□□□ 0.14
C9orf3-215ENST00000478473 PAGE4O60829 102 aa15.9■□□□□ 0.14
C9orf3-215ENST00000478473 FAM162BQ5T6X4 162 aa15.9■□□□□ 0.14
C9orf3-215ENST00000478473 TMUB2Q71RG4 321 aa15.9■□□□□ 0.14
C9orf3-215ENST00000478473 PRADC1Q9BSG0 188 aa15.9■□□□□ 0.14
C9orf3-215ENST00000478473 BOLA1Q9Y3E2 137 aa15.9■□□□□ 0.14
C9orf3-215ENST00000478473 B4DEV8 164 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 SH2D1AO60880 128 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 S100A9P06702 114 aaKnown RBP15.89■□□□□ 0.13
C9orf3-215ENST00000478473 S100A4P26447 101 aaKnown RBP15.89■□□□□ 0.13
C9orf3-215ENST00000478473 LINC01559Q495D7 138 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 UFSP1Q6NVU6 142 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 NFE4Q86UQ8 179 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 PARLQ9H300 379 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 SCRT2Q9NQ03 307 aa15.89■□□□□ 0.13
C9orf3-215ENST00000478473 RYR1P21817 5038 aa15.88■□□□□ 0.13
C9orf3-215ENST00000478473 TPT1P13693 172 aaKnown RBP15.88■□□□□ 0.13
C9orf3-215ENST00000478473 CDK2AP2O75956 126 aa15.87■□□□□ 0.13
C9orf3-215ENST00000478473 H2AFB1P0C5Y9 115 aa15.87■□□□□ 0.13
C9orf3-215ENST00000478473 EVI2AP22794 236 aa15.87■□□□□ 0.13
C9orf3-215ENST00000478473 AKR1C3P42330 323 aa15.87■□□□□ 0.13
C9orf3-215ENST00000478473 MLST8Q9BVC4 326 aa15.87■□□□□ 0.13
C9orf3-215ENST00000478473 TRAV1-1A0A0B4J248 108 aa15.86■□□□□ 0.13
C9orf3-215ENST00000478473 SPATA12Q7Z6I5 190 aa15.86■□□□□ 0.13
C9orf3-215ENST00000478473 TCTE3Q8IZS6 198 aa15.86■□□□□ 0.13
C9orf3-215ENST00000478473 NHLRC2Q8NBF2 726 aa15.86■□□□□ 0.13
C9orf3-215ENST00000478473 ARMS2P0C7Q2 107 aa15.85■□□□□ 0.13
C9orf3-215ENST00000478473 LINC00694P0DN24 101 aa15.85■□□□□ 0.13
C9orf3-215ENST00000478473 Q6ZSN1 163 aa15.85■□□□□ 0.13
C9orf3-215ENST00000478473 C10orf126Q8N4M7 172 aa15.85■□□□□ 0.13
C9orf3-215ENST00000478473 IGHV3-73A0A0B4J1V6 119 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 H3BVH4 76 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 PFDN1O60925 122 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 RAB5CP51148 216 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 KRTAP10-2P60368 255 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 LINC01556Q5JQF7 62 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 DMRTA1Q5VZB9 504 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 KRTAP17-1Q9BYP8 105 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 MSRB1Q9NZV6 116 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 TNFRSF18Q9Y5U5 241 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 HSPG2P98160 4391 aa15.84■□□□□ 0.13
C9orf3-215ENST00000478473 IGHV3-38A0A0C4DH36 116 aa15.83■□□□□ 0.12
C9orf3-215ENST00000478473 M0R036 132 aa15.83■□□□□ 0.12
C9orf3-215ENST00000478473 CXCL1P09341 107 aa15.83■□□□□ 0.12
C9orf3-215ENST00000478473 SCO2A0A1W2PP80 73 aa15.82■□□□□ 0.12
C9orf3-215ENST00000478473 RHODO00212 210 aa15.82■□□□□ 0.12
C9orf3-215ENST00000478473 LELP1Q5T871 98 aa15.82■□□□□ 0.12
C9orf3-215ENST00000478473 SYT8Q8NBV8 401 aa15.82■□□□□ 0.12
C9orf3-215ENST00000478473 GTSF1LQ9H1H1 148 aa15.82■□□□□ 0.12
C9orf3-215ENST00000478473 JPT2Q9H910 190 aa15.82■□□□□ 0.12
C9orf3-215ENST00000478473 EIF5AL1Q6IS14 154 aaKnown RBP15.81■□□□□ 0.12
C9orf3-215ENST00000478473 ATP6V0E2Q8NHE4 81 aa15.81■□□□□ 0.12
C9orf3-215ENST00000478473 C11orf52Q96A22 123 aa15.81■□□□□ 0.12
C9orf3-215ENST00000478473 SFRP2Q96HF1 295 aa15.81■□□□□ 0.12
C9orf3-215ENST00000478473 SAMD10Q9BYL1 202 aa15.81■□□□□ 0.12
C9orf3-215ENST00000478473 GRIFINA4D1Z8 144 aa15.8■□□□□ 0.12
C9orf3-215ENST00000478473 CRYGDP07320 174 aa15.8■□□□□ 0.12
C9orf3-215ENST00000478473 Q6ZNX1 250 aa15.8■□□□□ 0.12
C9orf3-215ENST00000478473 MANBALQ9NQG1 85 aa15.8■□□□□ 0.12
C9orf3-215ENST00000478473 DNAH5Q8TE73 4624 aa15.79■□□□□ 0.12
C9orf3-215ENST00000478473 TRAV8-6A0A0B4J262 113 aa15.79■□□□□ 0.12
C9orf3-215ENST00000478473 A0A1B0GV50 99 aa15.79■□□□□ 0.12
C9orf3-215ENST00000478473 BAGE2Q86Y30 109 aa15.79■□□□□ 0.12
C9orf3-215ENST00000478473 PGPEP1Q9NXJ5 209 aa15.79■□□□□ 0.12
C9orf3-215ENST00000478473 PHLDA3Q9Y5J5 127 aa15.79■□□□□ 0.12
C9orf3-215ENST00000478473 IBA57-AS1B1ANH7 110 aa15.78■□□□□ 0.12
C9orf3-215ENST00000478473 SULT1A2P50226 295 aa15.78■□□□□ 0.12
C9orf3-215ENST00000478473 ERVFC1-1P60608 527 aa15.78■□□□□ 0.12
C9orf3-215ENST00000478473 CCL20P78556 96 aa15.78■□□□□ 0.12
C9orf3-215ENST00000478473 APOBP04114 4563 aaKnown RBP15.77■□□□□ 0.12
C9orf3-215ENST00000478473 C1QBP02746 253 aa15.77■□□□□ 0.12
C9orf3-215ENST00000478473 ZFP82Q8N141 532 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 568.3 ms