RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CLEC7AQ9BXN2 247 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 GABARAPL1Q9H0R8 117 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 CST11Q9H112 138 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 MYO7AQ13402 2215 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 TECTAO75443 2155 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 SCN8AQ9UQD0 1980 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 POLEQ07864 2286 aa2.47□□□□□ -2.01
FNDC3B-209ENST00000478016 ZDBF2Q9HCK1 2354 aa2.46□□□□□ -2.01
FNDC3B-209ENST00000478016 PLXNA3P51805 1871 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 DCHS1Q96JQ0 3298 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3OR16-10A0A075B7F0 116 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3-16A0A0C4DH30 117 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 LOC285095A0A1B0GVY8 99 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 SERF1AO75920 110 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 PATE4P0C8F1 98 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 PIPP12273 146 aaPredicted RBP2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 LMO2P25791 158 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 RPL30P62888 115 aaKnown RBP2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 REG3AQ06141 175 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 MRGPRG-AS1Q2M3A8 158 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 FAM104BQ5XKR9 115 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 CEMP1Q6PRD7 247 aaPredicted RBP2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 TMEM61Q8N0U2 210 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 FAM216BQ8N7L0 139 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 CLDND2Q8NHS1 167 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 SPTSSAQ969W0 71 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 NXT2Q9NPJ8 142 aaKnown RBP2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 MRPL35Q9NZE8 188 aaKnown RBP2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 DPM3Q9P2X0 92 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 SMAD5-AS1Q9Y6J3 95 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 PTPRDP23468 1912 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 ZFHX4Q86UP3 3567 aa2.46□□□□□ -2.02
FNDC3B-209ENST00000478016 DMXL1Q9Y485 3027 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 IGKV1D-17A0A075B6S4 117 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3-74A0A0B4J1X5 117 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV1-24A0A0C4DH33 117 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 C2orf70A6NJV1 201 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 LOC730098B7Z3J9 87 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 H7BZZ5 65 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 GNRH2O43555 120 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 SLC25A16P16260 332 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 ELK1P19419 428 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 CKS2P33552 79 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 FUSP35637 526 aaKnown RBP eCLIP2.45□□□□□ -2.024e-7■■■□□ 14.6
FNDC3B-209ENST00000478016 PCBD1P61457 104 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 KLKP1Q107X0 134 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 NOXRED1Q6NXP6 359 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 LYPD5Q6UWN5 251 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 TOMM5Q8N4H5 51 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 ZNF645Q8N7E2 425 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 TMEM105Q8N8V8 129 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 NABP2Q9BQ15 211 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 OSTCQ9NRP0 149 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 NOTCH4Q99466 2003 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 DOCK7Q96N67 2140 aa2.45□□□□□ -2.02
FNDC3B-209ENST00000478016 CACNA1HO95180 2353 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 ZFHX2Q9C0A1 2572 aaPredicted RBP2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 FRYLO94915 3013 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3-72A0A0B4J1Y9 119 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 TRAV13-2A0A0B4J235 113 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 IGKV1-6A0A0C4DH72 117 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 SRRM5B3KS81 715 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 NTN3O00634 580 aaPredicted RBP2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 LEPROTO15243 131 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 CPSF4O95639 269 aaKnown RBP2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 IGKV1-39P01597 117 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 IGKV1D-39P04432 117 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 RPL27AP46776 148 aaKnown RBP2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 UBE2D3P61077 147 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 UBE2D2P62837 147 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 CYCSP99999 105 aaKnown RBP2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 BSPH1Q075Z2 132 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 CIRBPQ14011 172 aaKnown RBP2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 RHOHQ15669 191 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 SLC48A1Q6P1K1 146 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 LYPD2Q6UXB3 125 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 ZNF497Q6ZNH5 498 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 CYP2G1PQ6ZSU1 146 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 MIR17HGQ75NE6 70 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 DAND5Q8N907 189 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 SMIM4Q8WVI0 70 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 TMEM190Q8WZ59 177 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 ZNF714Q96N38 554 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 LITAFQ99732 161 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 OCR1Q9BZK8 76 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 TRAPPC1Q9Y5R8 145 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 GVINP1Q7Z2Y8 2422 aa2.44□□□□□ -2.02
FNDC3B-209ENST00000478016 FER1L5A0AVI2 2057 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 IGLV3-12A0A075B6K2 115 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV4-4A0A075B6R2 117 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3-43A0A0B4J1X8 118 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 TRAV3A0A0B4J244 114 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 IGKV3D-20A0A0C4DH25 116 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3-35A0A0C4DH35 117 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 J3QLW9 94 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 FXYD1O00168 92 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 IGHV3-13P01766 116 aa2.43□□□□□ -2.02
FNDC3B-209ENST00000478016 PIRTP0C851 137 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms