RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 HBBP68871 147 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 HAMPP81172 84 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 FADDQ13158 208 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 IFT20Q8IY31 132 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 GPX7Q96SL4 187 aaPredicted RBP-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 TRIM4Q9C037 500 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 BATF3Q9NR55 127 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 SLC22A13Q9Y226 551 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 MPC1Q9Y5U8 109 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 KDM5AP29375 1690 aaKnown RBP-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 PCF11O94913 1555 aaKnown RBP-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 LOC107984640A0A0U1RRK4 108 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 RBAKDNA6NC62 111 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 EDF1O60869 148 aaKnown RBP-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 IFNA5P01569 189 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 UNQ5815/PRO19632Q6UWF5 114 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 MCEEQ96PE7 176 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 OR2H1Q9GZK4 316 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 PRELID3BQ9Y3B1 194 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 SPCS1Q9Y6A9 102 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 TRAPPC8Q9Y2L5 1435 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 MYH1P12882 1939 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 DNAH1Q9P2D7 4330 aa-1.44□□□□□ -2.64
NCKAP1-204ENST00000477988 FAM135BQ49AJ0 1406 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 DMXL1Q9Y485 3027 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 TRGV1A0A0A0MS02 117 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 TRBV7-1A0A0A6YYK4 115 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 TMEM189A5PLL7 270 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 TMEM210A6NLX4 147 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 IFITM5A6NNB3 132 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 BANF1O75531 89 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 MT-ND6P03923 174 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 IFNA6P05013 189 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 SAA1P0DJI8 122 aaPredicted RBP-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 SPRR1BP22528 89 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 MRPS36P82909 103 aaKnown RBP-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 AKIRIN2Q53H80 203 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 TMEM97Q5BJF2 176 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 SLC48A1Q6P1K1 146 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 OR2J1Q9GZK6 312 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 CAMSAP1Q5T5Y3 1602 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 WDR7Q9Y4E6 1490 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 ARFGEF1Q9Y6D6 1849 aa-1.45□□□□□ -2.64
NCKAP1-204ENST00000477988 REV3LO60673 3130 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 ZNF609O15014 1411 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 CXorf51AA0A1B0GTR3 108 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 HMGB3O15347 200 aaKnown RBP-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 MFSD11O43934 449 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 IFNA14P01570 189 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 TAF1AQ15573 450 aaPredicted RBP-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 PARP14Q460N5 1801 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 ZMYM4Q5VZL5 1548 aa-1.46□□□□□ -2.64
NCKAP1-204ENST00000477988 ITPR1Q14643 2758 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 KIF13AQ9H1H9 1805 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 FXYD6-FXYD2A0A087WZ82 144 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 TCRBV3S1A0A5B6 114 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 PIN1P1O15428 100 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 BCE1O60756 84 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 ADCYAP1P18509 176 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 MAXP61244 160 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 MAGOHP61326 146 aaKnown RBP-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 CCDC122Q5T0U0 273 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 OR2T2Q6IF00 324 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 TRAPPC5Q8IUR0 188 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 C4orf33Q8N1A6 199 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 OR4S1Q8NGB4 309 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 TP53AIP1Q9HCN2 124 aa-1.47□□□□□ -2.64
NCKAP1-204ENST00000477988 TANC2Q9HCD6 1990 aa-1.47□□□□□ -2.65
NCKAP1-204ENST00000477988 SACSQ9NZJ4 4579 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 C5orf58C9J3I9 102 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 M0R2P5 195 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 DEGS1O15121 323 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 APOC1P02654 83 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 TFF1P04155 84 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 POLR2JP52435 117 aaKnown RBP-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 GTF2A1P52655 376 aaPredicted RBP-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 DCDP81605 110 aaKnown RBP-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 SSBP1Q04837 148 aaKnown RBP-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 OR10X1Q8NGY0 326 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 FKBP11Q9NYL4 201 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 SCP2D1Q9UJQ7 156 aa-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 RIF1Q5UIP0 2472 aaKnown RBP-1.48□□□□□ -2.65
NCKAP1-204ENST00000477988 NUP210Q8TEM1 1887 aaPredicted RBP-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 MTORP42345 2549 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 TRAV1-2A0A0B4J238 106 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 LOC107986453A0A1B0GWG9 222 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 KPNA4O00629 521 aaPredicted RBP-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 OGNP20774 298 aaKnown RBP-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 NCALDP61601 193 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 CYP2G1PQ6ZSU1 146 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 OR8J2Q8NGG1 315 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 COX7B2Q8TF08 81 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 SDF2Q99470 211 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 RTL8AQ9BWD3 113 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 V9GYV3 84 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 DYNC1H1Q14204 4646 aaKnown RBP-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 ZFYVE9O95405 1425 aa-1.49□□□□□ -2.65
NCKAP1-204ENST00000477988 TRANK1O15050 2925 aa-1.5□□□□□ -2.65
NCKAP1-204ENST00000477988 KDM5CP41229 1560 aa-1.5□□□□□ -2.65
NCKAP1-204ENST00000477988 ERCC6L2Q5T890 1561 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms