RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 UBE2D1P51668 147 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 EFNA4P52798 201 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 HERVK_113P61574 105 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 C16orf92Q96LL3 132 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 C1QTNF4Q9BXJ3 329 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 POLEQ07864 2286 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 TRAV26-2A0A0B4J265 109 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 ECSCRQ19T08 205 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 CLEC19AQ6UXS0 136 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 GLMPQ8WWB7 406 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 BAALCQ8WXS3 180 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 RASL10AQ92737 203 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 SELENOKQ9Y6D0 94 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 AGRNO00468 2067 aa10.31□□□□□ -0.76
HLA-DMA-208ENST00000477541 NXPH4O95158 308 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 ATP5G2Q06055 141 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 C2orf66Q6UXQ4 117 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 OR10J6PQ8NGY7 276 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 SPOCK3Q9BQ16 436 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 BRI3O95415 125 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 CFAP126Q5VTH2 177 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
HLA-DMA-208ENST00000477541 LRBAP50851 2863 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 NBASA2RRP1 2371 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 APOMO95445 188 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 COX6B1P14854 86 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 TMEM141Q96I45 108 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 PHLDA3Q9Y5J5 127 aa10.29□□□□□ -0.76
HLA-DMA-208ENST00000477541 IGHV4OR15-8A0A075B7B6 117 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 A0A087WW49 117 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 S100A4P26447 101 aaKnown RBP10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 UBE2D3P61077 147 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 UBE2D2P62837 147 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 FOXI1Q12951 378 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 PCNX1Q96RV3 2341 aa10.28□□□□□ -0.76
HLA-DMA-208ENST00000477541 IGHV3-35A0A0C4DH35 117 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 FAM90A27PA6NNH2 459 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 M0QXV9 152 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 NDUFA4O00483 81 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 SH2D6Q7Z4S9 175 aa10.27□□□□□ -0.76
HLA-DMA-208ENST00000477541 CENPEQ02224 2701 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 IGHV3OR16-8A0A075B7F1 116 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 H3BUA1 57 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 PRR30Q53SZ7 412 aaPredicted RBP10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 C19orf54Q5BKX5 351 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 HIST2H2BCQ6DN03 193 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 AJUBAQ96IF1 538 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 TIMM17AQ99595 171 aa10.27□□□□□ -0.77
HLA-DMA-208ENST00000477541 RNF223E7ERA6 249 aa10.26□□□□□ -0.77
HLA-DMA-208ENST00000477541 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
HLA-DMA-208ENST00000477541 PRR9Q5T870 116 aa10.26□□□□□ -0.77
HLA-DMA-208ENST00000477541 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
HLA-DMA-208ENST00000477541 C5orf56Q8N8D9 126 aa10.26□□□□□ -0.77
HLA-DMA-208ENST00000477541 ITPR3Q14573 2671 aa10.26□□□□□ -0.77
HLA-DMA-208ENST00000477541 IGHV3-66A0A0C4DH42 116 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 SOCS3O14543 225 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 CD7P09564 240 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 PMVKQ15126 192 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 SBSPONQ8IVN8 264 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 PPDPFLQ8WWR9 84 aa10.25□□□□□ -0.77
HLA-DMA-208ENST00000477541 ZFP36P26651 326 aaKnown RBP10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 MOB4Q9Y3A3 225 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 SPENQ96T58 3664 aaKnown RBP10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 TRAV41A0A0B4J266 112 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 LY6HO94772 140 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 TSPAN13O95857 204 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 KRTAP21-3Q3LHN1 58 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 CLEC2AQ6UVW9 174 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 GPHB5Q86YW7 130 aa10.24□□□□□ -0.77
HLA-DMA-208ENST00000477541 VCYO14598 125 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 SAA4P35542 130 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 ARL3P36405 182 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 ANXA2RQ3ZCQ2 193 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 TEN1Q86WV5 123 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 USMG5Q96IX5 58 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 C20orf173Q96LM9 149 aa10.23□□□□□ -0.77
HLA-DMA-208ENST00000477541 ARHGAP32A7KAX9 2087 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 ANKHD1Q8IWZ3 2542 aaKnown RBP10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 A0A0J9YY99 117 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
HLA-DMA-208ENST00000477541 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms