RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SLC50A1Q9BRV3 221 aa0.84□□□□□ -2.27
TARDBP-208ENST00000477447 AP4S1Q9Y587 144 aa0.84□□□□□ -2.27
TARDBP-208ENST00000477447 LY96Q9Y6Y9 160 aa0.84□□□□□ -2.27
TARDBP-208ENST00000477447 PLEKHH2Q8IVE3 1493 aa0.84□□□□□ -2.28
TARDBP-208ENST00000477447 PIK3C2AO00443 1686 aa0.84□□□□□ -2.28
TARDBP-208ENST00000477447 PRDM15P57071 1507 aaPredicted RBP0.84□□□□□ -2.28
TARDBP-208ENST00000477447 ADAMTS12P58397 1594 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 PTPRBP23467 1997 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 BAZ2BQ9UIF8 2168 aaKnown RBP0.83□□□□□ -2.28
TARDBP-208ENST00000477447 FOCADQ5VW36 1801 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 XIRP1Q702N8 1843 aaKnown RBP0.83□□□□□ -2.28
TARDBP-208ENST00000477447 A0A087WSZ3 146 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 IGHV1-24A0A0C4DH33 117 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 UBE2L5PA0A1B0GUS4 154 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 hDV103S1A0JD37 113 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 FAM24AA6NFZ4 105 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
TARDBP-208ENST00000477447 F8W1H4 67 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 J3QLW9 94 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 PDCD5O14737 125 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SNCGO76070 127 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 APOC3P02656 99 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 GYPAP02724 150 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 CCKP06307 115 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 PIRTP0C851 137 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 CBLN1P23435 193 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 CKS2P33552 79 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SNCAP37840 140 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SSR2P43308 183 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 UBE2L3P68036 154 aaKnown RBP0.83□□□□□ -2.28
TARDBP-208ENST00000477447 ELOBQ15370 118 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 ESRGQ1W209 222 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 C12orf73Q69YU5 71 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 DPPA3Q6W0C5 159 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 C5orf38Q86SI9 138 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 C9orf163Q8N9P6 203 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 C15orf53Q8NAA6 179 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 LINC00301Q8NCQ3 95 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 TSKUQ8WUA8 353 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SPTSSAQ969W0 71 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 S100A13Q99584 98 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SMCO4Q9NRQ5 59 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 TMEM242Q9NWH2 141 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 NHP2Q9NX24 153 aaKnown RBP0.83□□□□□ -2.28
TARDBP-208ENST00000477447 UQCR10Q9UDW1 63 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 TPRKBQ9Y3C4 175 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 PXDNQ92626 1479 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 DICER1Q9UPY3 1922 aaKnown RBP0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SPHKAPQ2M3C7 1700 aa0.83□□□□□ -2.28
TARDBP-208ENST00000477447 SMARCA4P51532 1647 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 KMT2BQ9UMN6 2715 aaPredicted RBP0.82□□□□□ -2.28
TARDBP-208ENST00000477447 NCOA2Q15596 1464 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 MALRD1Q5VYJ5 2156 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 ARHGEF28Q8N1W1 1705 aaKnown RBP0.82□□□□□ -2.28
TARDBP-208ENST00000477447 KIAA1551Q9HCM1 1747 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 IGKV1D-42A0A075B6H8 117 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 hADV29S1A0JD25 119 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 E7EUB6 86 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 C17orf112F2Z3M2 114 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 GNGT2O14610 69 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 LYRM1O43325 122 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 CYB5AP00167 134 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 IGKCP01834 107 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 IL5P05113 134 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 IGLC2P0DOY2 106 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 IGLC3P0DOY3 106 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 IL9P15248 144 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 ATP5EP56381 51 aaPredicted RBP0.82□□□□□ -2.28
TARDBP-208ENST00000477447 ZNF345Q14585 488 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 RHOHQ15669 191 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 KRTAP26-1Q6PEX3 210 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 ZNF826PQ6ZT77 177 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 COMMD6Q7Z4G1 85 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 OR8B3Q8NGG8 313 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 CST11Q9H112 138 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 MRPL35Q9NZE8 188 aaKnown RBP0.82□□□□□ -2.28
TARDBP-208ENST00000477447 LINC00474Q9P2X8 69 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 NDUFA12Q9UI09 145 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 PLIN4Q96Q06 1357 aa0.82□□□□□ -2.28
TARDBP-208ENST00000477447 TENM1Q9UKZ4 2725 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 BCORL1Q5H9F3 1711 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 WDR90Q96KV7 1748 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 ANKRD26Q9UPS8 1709 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 CUL9Q8IWT3 2517 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 PTPRMP28827 1452 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 DOCK3Q8IZD9 2030 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 MAGI3Q5TCQ9 1506 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 ABCA10Q8WWZ4 1543 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 SIPA1L1O43166 1804 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 TRAV3A0A0B4J244 114 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 C5orf67F2Z3F1 127 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 M0R233 179 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 ATOX1O00244 68 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 CFDP00746 253 aaPredicted RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 MIFP14174 115 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 POLR2JP52435 117 aaKnown RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 DSCR4P56555 118 aaPredicted RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 CCL8P80075 99 aa0.81□□□□□ -2.28
TARDBP-208ENST00000477447 RBM3P98179 157 aaKnown RBP0.81□□□□□ -2.28
TARDBP-208ENST00000477447 DEFA5Q01523 94 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms