RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 PLAC8L1A1L4L8 177 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 LST1O00453 97 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 COX7A2P2O60397 106 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 TCRAP04437 139 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 ARMS2P0C7Q2 107 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 GP9P14770 177 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 GATA1P15976 413 aaPredicted RBP3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 CD24P25063 80 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 CD70P32970 193 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 SUB1P53999 127 aaKnown RBP eCLIP3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 ERCC8Q13216 396 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 FAM222AQ5U5X8 452 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 ATP5EP2Q5VTU8 51 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 DGAT2L7PQ6IED9 249 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 GUSBP11Q6P575 273 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 FXYD5Q96DB9 178 aa3.3□□□□□ -1.88
PIKFYVE-209ENST00000477200 LRP4O75096 1905 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 TRAV41A0A0B4J266 112 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 A0A0J9YX75 114 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 SS18L1O75177 396 aaPredicted RBP3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 STATHP02808 62 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 ZNF22P17026 224 aaPredicted RBP3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 DSCR10P59022 87 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 LAGE3Q14657 143 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 C2orf83Q53S99 150 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 S100A7L2Q5SY68 101 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 FAM27BQ5VT28 67 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 C10orf113Q5VZT2 155 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 LINC00305Q7Z4B0 112 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 COX8CQ7Z4L0 72 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 Q8IYB0 196 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 WFDC11Q8NEX6 87 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 SRSF12Q8WXF0 261 aaKnown RBP3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 CNFNQ9BYD5 112 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 DAZ1Q9NQZ3 744 aaKnown RBP3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 COL4A6Q14031 1691 aa3.29□□□□□ -1.88
PIKFYVE-209ENST00000477200 COL5A1P20908 1838 aaPredicted RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 GON4LQ3T8J9 2241 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 TRAV3A0A0B4J244 114 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGHV1-58A0A0C4DH39 117 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 RBMY1BA6NDE4 496 aaKnown RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 RBMY1EA6NEQ0 496 aaKnown RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 LILRA5A6NI73 299 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 C17orf98A8MV24 154 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 USP17L23D6RBM5 183 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 WNT9BO14905 357 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 RBMY1DP0C7P1 496 aaKnown RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 RBMY1A1P0DJD3 496 aaKnown RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 RBMY1CP0DJD4 496 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 PLGLAQ15195 96 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 RBMY1FQ15415 496 aaKnown RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 Q1RN00 199 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 ORMDL2Q53FV1 153 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 IGFL2Q6UWQ7 119 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 LINC00322Q6ZN03 302 aaPredicted RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 VKORC1L1Q8N0U8 176 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 LYPD1Q8N2G4 141 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 FAM216BQ8N7L0 139 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 NFAM1Q8NET5 270 aaPredicted RBP3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 FGFBP3Q8TAT2 258 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 TIMM21Q9BVV7 248 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 TMEM14CQ9P0S9 112 aa3.28□□□□□ -1.88
PIKFYVE-209ENST00000477200 COL4A5P29400 1685 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 ALPK2Q86TB3 2170 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 IGLV2-18A0A075B6J9 118 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 TRBV10-3A0A0K0K1G6 114 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 TMEM30CPA0ZSE6 113 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 SDHAF1A6NFY7 115 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 LYRM9A8MSI8 78 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 IQCF6A8MYZ5 107 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 H0YGG7 62 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 M0R1B8 84 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 NDUFB3O43676 98 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 NDUFA3O95167 84 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 IGHV4-39P01824 125 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 CLPSP04118 112 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 KLKP1Q107X0 134 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 SFTA2Q6UW10 78 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 THAP8Q8NA92 274 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 NUP37Q8NFH4 326 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 ZNF524Q96C55 264 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 SLC50A1Q9BRV3 221 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 EMC6Q9BV81 110 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 PHPT1Q9NRX4 125 aaPredicted RBP3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 TMEM14BQ9NUH8 114 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 ICOSQ9Y6W8 199 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 TANC2Q9HCD6 1990 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 SPAG17Q6Q759 2223 aa3.27□□□□□ -1.89
PIKFYVE-209ENST00000477200 MYO7BQ6PIF6 2116 aa3.26□□□□□ -1.89
PIKFYVE-209ENST00000477200 MYO7AQ13402 2215 aa3.26□□□□□ -1.89
PIKFYVE-209ENST00000477200 TRAV7A0A075B6U4 112 aa3.26□□□□□ -1.89
PIKFYVE-209ENST00000477200 IGLV3-32A0A0A0MS00 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms