RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 GBGT1Q8N5D6 347 aa4.27□□□□□ -1.73
CDKN1B-204ENST00000477087 ZC2HC1AQ96GY0 325 aa4.27□□□□□ -1.73
CDKN1B-204ENST00000477087 CITED1Q99966 193 aa4.27□□□□□ -1.73
CDKN1B-204ENST00000477087 C20orf144Q9BQM9 153 aa4.27□□□□□ -1.73
CDKN1B-204ENST00000477087 RNASE7Q9H1E1 156 aaKnown RBP4.27□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF256Q9Y2P7 627 aaPredicted RBP4.27□□□□□ -1.73
CDKN1B-204ENST00000477087 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 A0A0J9YX75 114 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 A0A1B0GXF2 115 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF705FA8MVS1 300 aaPredicted RBP4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 IGLC6P0CF74 106 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 TSPOP30536 169 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 EBLN2Q6P2I7 272 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF493Q6ZR52 646 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 ZFAND2AQ8N6M9 145 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 NUP35Q8NFH5 326 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 FRZBQ92765 325 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 LINC00467Q9BRT7 94 aa4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 MCRIP2Q9BUT9 160 aaKnown RBP4.26□□□□□ -1.73
CDKN1B-204ENST00000477087 F8P00451 2351 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 C2CD3Q4AC94 2353 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 NSD1Q96L73 2696 aaPredicted RBP4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 TGIF2-C20orf24A0A0A6YYL0 155 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 HIGD1CA8MV81 97 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 SH2D1AO60880 128 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 HLA-DQA1P01909 254 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 OR5AL1P0C617 328 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 HLA-DMBP28068 263 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 RPS10P46783 165 aaKnown RBP4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 KRTAP10-3P60369 221 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 RIGQ13278 110 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 TMEM61Q8N0U2 210 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 RNF182Q8N6D2 247 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 STPG4Q8N801 248 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF738Q8NE65 137 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 OR2D3Q8NGH3 330 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 GTSF1Q8WW33 167 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 PTH2Q96A98 100 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 KCNS1Q96KK3 526 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 SGK494Q96LW2 274 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 URGCP-MRPS24S4R325 110 aa4.25□□□□□ -1.73
CDKN1B-204ENST00000477087 IGKV3D-20A0A0C4DH25 116 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 C5orf52A6NGY3 159 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 H3BMM0 161 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 SNAI2O43623 268 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 TRGC2P03986 189 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 HLA-DRB4P13762 266 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 CTRLP40313 264 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 LEPP41159 167 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 CDKN1BP46527 198 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 ZNF80P51504 273 aaPredicted RBP4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 Q0VG73 95 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 DEFB136Q30KP8 78 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 AMTNQ6UX39 209 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 DEFB125Q8N687 156 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 NHLRC2Q8NBF2 726 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 DYNLRB2Q8TF09 96 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 TMEM158Q8WZ71 300 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 PACRGQ96M98 296 aaPredicted RBP4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 LITAFQ99732 161 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 NDUFAF3Q9BU61 184 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 GPR61Q9BZJ8 451 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 RPH3ALQ9UNE2 315 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 HLA-DRB4X5D2U9 266 aa4.24□□□□□ -1.73
CDKN1B-204ENST00000477087 ZFHX3Q15911 3703 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 BAHCC1Q9P281 2608 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BKO60814 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BJP06899 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 GPX1P07203 203 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 ESDP10768 282 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BOP23527 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BBP33778 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BDP58876 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BCP62807 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 CACNG7P62955 275 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 ERCC8Q13216 396 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST2H2BEQ16778 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 PSMG4Q5JS54 123 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 C9orf66Q5T8R8 295 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 PRR27Q6MZM9 219 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 TMEM136Q6ZRR5 245 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 Q71RC1 249 aaPredicted RBP4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BHQ93079 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BNQ99877 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 HIST1H2BMQ99879 126 aa4.23□□□□□ -1.73
CDKN1B-204ENST00000477087 ZMAT5Q9UDW3 170 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms