RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 SAPCD1Q5SSQ6 148 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 CFAP126Q5VTH2 177 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 TXNDC17Q9BRA2 123 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 MAP1LC3B2A6NCE7 125 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 FUSP35637 526 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPRN-213ENST00000476930 FHITP49789 147 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 CRIP1P50238 77 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 Q86TA4 180 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 NHLRC2Q8NBF2 726 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 OR11H4Q8NGC9 324 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 MAP1LC3BQ9GZQ8 125 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
PTPRN-213ENST00000476930 FABP5P3A8MUU1 101 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 CDK2AP2O75956 126 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 PPT1P50897 306 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 Q6ZSN1 163 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 KCNRGQ8N5I3 272 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 HIST1H2BAQ96A08 127 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 PTH2Q96A98 100 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 ZC2HC1AQ96GY0 325 aa7.56□□□□□ -1.2
PTPRN-213ENST00000476930 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
PTPRN-213ENST00000476930 DNAH10OSP0CZ25 163 aa7.55□□□□□ -1.2
PTPRN-213ENST00000476930 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
PTPRN-213ENST00000476930 JPT2Q9H910 190 aa7.55□□□□□ -1.2
PTPRN-213ENST00000476930 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 M0R036 132 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 EVI2AP22794 236 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 S100A4P26447 101 aaKnown RBP7.54□□□□□ -1.2
PTPRN-213ENST00000476930 ZNF345Q14585 488 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 RHOHQ15669 191 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 CST9LP1Q5W188 147 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 SH2D6Q7Z4S9 175 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
PTPRN-213ENST00000476930 A0A1B0GV50 99 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 GRIFINA4D1Z8 144 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 B4DEV8 164 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 KRBOX1C9JBD0 128 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 H3BVH4 76 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 CIDEAO60543 219 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 PAGE4O60829 102 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 SH2D1AO60880 128 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 CRYGDP07320 174 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 ASIPP42127 132 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 TIRAPP58753 221 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 LGALSLQ3ZCW2 172 aaPredicted RBP7.53□□□□□ -1.2
PTPRN-213ENST00000476930 COX8CQ7Z4L0 72 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 NFE4Q86UQ8 179 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 STOML3Q8TAV4 291 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 FAM213BQ8TBF2 198 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 FMC1Q96HJ9 113 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 SAMD10Q9BYL1 202 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 PARLQ9H300 379 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 IL36BQ9NZH7 164 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 Q9UF83 564 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 ZFP30Q9Y2G7 519 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 VPS13BQ7Z7G8 4022 aa7.53□□□□□ -1.2
PTPRN-213ENST00000476930 A0A087WTM6 91 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 IGHV3-38A0A0C4DH36 116 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 ARMS2P0C7Q2 107 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 SEC11BP0C7V7 166 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 MGST1P10620 155 aaKnown RBP7.52□□□□□ -1.21
PTPRN-213ENST00000476930 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 UBE2G1P62253 170 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 MAPKAPK5-AS1Q8N8E1 139 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 SFT2D1Q8WV19 159 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
PTPRN-213ENST00000476930 ZNF471Q9BX82 626 aaPredicted RBP7.52□□□□□ -1.21
PTPRN-213ENST00000476930 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 A0A0D9SG52 128 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 KANTRA0A1W2PQU2 76 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 A8MWV9 139 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 K7EP13 123 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 BCL2L11O43521 198 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 LTAP01374 205 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 ZNF674Q2M3X9 581 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 DNLZQ5SXM8 178 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 FAM162BQ5T6X4 162 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 C14orf178Q8N769 122 aaPredicted RBP7.51□□□□□ -1.21
PTPRN-213ENST00000476930 ATP6V0E2Q8NHE4 81 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
PTPRN-213ENST00000476930 TRAV8-6A0A0B4J262 113 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 EREGO14944 169 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 IGHV3-30P01768 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 IGHV3-33P01772 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 LINC00694P0DN24 101 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 IGHV3-30-5P0DP03 117 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 AKR1C3P42330 323 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 GAGE1Q13065 139 aa7.5□□□□□ -1.21
PTPRN-213ENST00000476930 GAGE4Q13068 117 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms