RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CDKN1BP46527 198 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 CRIP1P50238 77 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 FOXA3P55318 350 aaPredicted RBP4.62□□□□□ -1.67
CLDN4-205ENST00000476494 ODF3L2Q3SX64 289 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 COX19Q49B96 90 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 ACTL10Q5JWF8 245 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 Q6AWC8 147 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 STHQ8IWL8 128 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 ZFAND2AQ8N6M9 145 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 Q8TAT8 98 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 TSKUQ8WUA8 353 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 C20orf144Q9BQM9 153 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 RNASE7Q9H1E1 156 aaKnown RBP4.62□□□□□ -1.67
CLDN4-205ENST00000476494 C11orf68Q9H3H3 251 aaKnown RBP4.62□□□□□ -1.67
CLDN4-205ENST00000476494 SELENOKQ9Y6D0 94 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 V9GYV3 84 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 A0A1W2PPQ1 181 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 C7orf71A4D174 169 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 UBE2CO00762 179 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 SH2D1AO60880 128 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 ORM1P02763 201 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 ZNF705DP0CH99 300 aaPredicted RBP4.61□□□□□ -1.67
CLDN4-205ENST00000476494 ZNF705BP0CI00 300 aaPredicted RBP4.61□□□□□ -1.67
CLDN4-205ENST00000476494 RNASE4P34096 147 aaKnown RBP4.61□□□□□ -1.67
CLDN4-205ENST00000476494 ELOBQ15370 118 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 LINC01559Q495D7 138 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 GDF5OSQ5U4N7 250 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 TMEM88Q6PEY1 159 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 MORN3Q6PF18 240 aaPredicted RBP4.61□□□□□ -1.67
CLDN4-205ENST00000476494 AMTNQ6UX39 209 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 OR2D3Q8NGH3 330 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 FRZBQ92765 325 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 KCNS1Q96KK3 526 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 PYGO2Q9BRQ0 406 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 C1QTNF4Q9BXJ3 329 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 NAT8BQ9UHF3 227 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
CLDN4-205ENST00000476494 A0A1B0GW15 77 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 KNCNA6PVL3 124 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 COLCA2A8K830 154 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 F2Z2F3 143 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 SCO1O75880 301 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 S100A8P05109 93 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 ZNF80P51504 273 aaPredicted RBP4.6□□□□□ -1.67
CLDN4-205ENST00000476494 TDRG1Q3Y452 100 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 DNLZQ5SXM8 178 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 WDR73Q6P4I2 378 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 RASL11AQ6T310 242 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 ATP5L2Q7Z4Y8 100 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 TRPT1Q86TN4 253 aaKnown RBP4.6□□□□□ -1.67
CLDN4-205ENST00000476494 CBLN2Q8IUK8 224 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 BORCS7Q96B45 105 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 YPEL4Q96NS1 127 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 LINC00467Q9BRT7 94 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 FAT4Q6V0I7 4981 aa4.6□□□□□ -1.67
CLDN4-205ENST00000476494 KIR2DL5BA0A0G2JN68 375 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 KIR2DL5BA0A0G2JPC4 375 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 ZNF324O75467 553 aaPredicted RBP4.59□□□□□ -1.67
CLDN4-205ENST00000476494 INSP01308 110 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 IGKV3-20P01619 116 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 TYMSP04818 313 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 FAM3BP58499 235 aaPredicted RBP4.59□□□□□ -1.67
CLDN4-205ENST00000476494 DEFB1P60022 68 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 SPINK13Q1W4C9 94 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 KIR2DL5AQ8N109 375 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 TMEM256Q8N2U0 113 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 KIR2DL5BQ8NHK3 375 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 FAM210BQ96KR6 192 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 NEU1Q99519 415 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 URGCP-MRPS24S4R325 110 aa4.59□□□□□ -1.67
CLDN4-205ENST00000476494 TRAV12-3A0A0B4J271 114 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 IGKV3D-20A0A0C4DH25 116 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 A0A1B0GUT8 65 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 HIGD1CA8MV81 97 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 M0R2Z0 102 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 MT-ND6P03923 174 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 OR5AL1P0C617 328 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 PRB4P10163 310 aaPredicted RBP4.58□□□□□ -1.68
CLDN4-205ENST00000476494 RAB5AP20339 215 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 ASIPP42127 132 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 CACNG7P62955 275 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 RIGQ13278 110 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 GFI1BQ5VTD9 330 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 FER1L6-AS1Q8NA97 138 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 NUP35Q8NFH5 326 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 GTSF1Q8WW33 167 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 SSBP4Q9BWG4 385 aaPredicted RBP4.58□□□□□ -1.68
CLDN4-205ENST00000476494 GNB1LQ9BYB4 327 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 TP53TG3Q9ULZ0 132 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 GOLT1BQ9Y3E0 138 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 MUC2Q02817 5179 aa4.58□□□□□ -1.68
CLDN4-205ENST00000476494 TNXBP22105 4242 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 TRGV11A0A075B6L2 103 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 IGHV1OR15-1A0A075B7D0 117 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 TGIF2-C20orf24A0A0A6YYL0 155 aa4.57□□□□□ -1.68
CLDN4-205ENST00000476494 CRXO43186 299 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms