RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 NDUFS5O43920 106 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 NDUFV3P56181 108 aaKnown RBP4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 SEC61GP60059 68 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 COL5A1P20908 1838 aaPredicted RBP4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 PSCAO43653 123 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 IGHV1-8P0DP01 117 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 RNF183Q96D59 192 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 DAZ1Q9NQZ3 744 aaKnown RBP4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 PKIGQ9Y2B9 76 aa4.85□□□□□ -1.63
HNRNPU-208ENST00000475997 NXPH4O95158 308 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 PCP2Q8IVA1 136 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 OPRPNQ99935 248 aaPredicted RBP4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 ICOSQ9Y6W8 199 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 PROP1O75360 226 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 PRB4P10163 310 aaPredicted RBP4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 THAP8Q8NA92 274 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 RHPN1-AS1Q9BWJ2 59 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 SPRNQ5BIV9 151 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 TMEM14BQ9NUH8 114 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 CEP295Q9C0D2 2601 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 NCKAP5O14513 1909 aa4.84□□□□□ -1.63
HNRNPU-208ENST00000475997 VPS13AQ96RL7 3174 aa4.84□□□□□ -1.64
HNRNPU-208ENST00000475997 C17orf58Q2M2W7 97 aa4.84□□□□□ -1.64
HNRNPU-208ENST00000475997 C3orf36Q3SXR2 165 aa4.84□□□□□ -1.64
HNRNPU-208ENST00000475997 GAFA1Q96PS6 74 aa4.84□□□□□ -1.64
HNRNPU-208ENST00000475997 LINC00527Q9UJ94 153 aa4.84□□□□□ -1.64
HNRNPU-208ENST00000475997 KMT2EQ8IZD2 1858 aa4.84□□□□□ -1.64
HNRNPU-208ENST00000475997 IGHV1OR15-1A0A075B7D0 117 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 LYRM9A8MSI8 78 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 K7EM74 188 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 NUPR1O60356 82 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 IGLV1-44P01699 117 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 EFNA4P52798 201 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 SLC25A29Q8N8R3 303 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 C14orf132Q9NPU4 83 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 MBD3L4A6NDZ8 208 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 MBD3L3A6NE82 208 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 MBD3L5A6NJ08 208 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 K7ERS5 55 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 ASPHD1Q5U4P2 390 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 UBE2DNLQ8IWF7 75 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 MBD3L2Q8NHZ7 208 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 NAV3Q8IVL0 2385 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 LYNX1G3V0Z9 82 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 LYNX1P0DP58 116 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 WT1P19544 449 aaPredicted RBP4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 ATP5EP2Q5VTU8 51 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 TMEM200BQ69YZ2 307 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 DYNAPQ8N1N2 210 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 DEFB104AQ8WTQ1 72 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 RMI2Q96E14 147 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 MUC6Q6W4X9 2439 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 A4D1N5 150 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 CUL9Q8IWT3 2517 aa4.83□□□□□ -1.64
HNRNPU-208ENST00000475997 NDUFC1O43677 76 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 LINC01560Q8TB33 94 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 Q8TCH9 128 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 LENEPQ9Y5L5 61 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 REV3LO60673 3130 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 BUB3O43684 328 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 TRBV12-3P01733 135 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 P0C879 139 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 CD24P25063 80 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 PLA2G2CQ5R387 149 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 C1orf195Q5TG92 126 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 RNASE6Q93091 150 aaKnown RBP4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 Q9H8V8 135 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 KIAA1549Q9HCM3 1950 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 K7EN84 100 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 TANC2Q9HCD6 1990 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 VMO1Q7Z5L0 202 aa4.82□□□□□ -1.64
HNRNPU-208ENST00000475997 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 FXYD2P54710 66 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 PRR20EP86478 221 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 PRR20CP86479 221 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 PRR20DP86480 221 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 PRR20BP86481 221 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 PRR20AP86496 221 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 MSMPQ1L6U9 139 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 LYPD2Q6UXB3 125 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 EYSQ5T1H1 3165 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 A0A0U1RQV1 116 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 NDPQ00604 133 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 C3orf56Q8N813 242 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 C11orf44Q8N8P7 122 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 DKK4Q9UBT3 224 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 FRMD6-AS1P0C7T7 363 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 ZNRF2Q8NHG8 242 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 PIFOQ8TCI5 191 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 C20orf197Q8N268 126 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 C8orf49Q96NF6 230 aa4.81□□□□□ -1.64
HNRNPU-208ENST00000475997 SND1-IT1Q9HBX3 110 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms