RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SPATA12Q7Z6I5 190 aa8.35□□□□□ -1.07
SSR1-205ENST00000475213 C9orf85Q96MD7 179 aa8.35□□□□□ -1.07
SSR1-205ENST00000475213 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
SSR1-205ENST00000475213 ARL2-SNX15V9GYD0 113 aa8.35□□□□□ -1.07
SSR1-205ENST00000475213 MAP1LC3B2A6NCE7 125 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 PEX7O00628 323 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 RS1O15537 224 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 RNASE3P12724 160 aaKnown RBP8.34□□□□□ -1.07
SSR1-205ENST00000475213 PPT1P50897 306 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 CFAP126Q5VTH2 177 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 NKX6-2Q9C056 277 aaPredicted RBP8.34□□□□□ -1.07
SSR1-205ENST00000475213 MAP1LC3BQ9GZQ8 125 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 DNAH5Q8TE73 4624 aa8.34□□□□□ -1.07
SSR1-205ENST00000475213 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 PGPEP1LA6NFU8 196 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
SSR1-205ENST00000475213 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 ZNF506Q5JVG8 444 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 Q86TA4 180 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 HIST1H2BAQ96A08 127 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 PTH2Q96A98 100 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 TNFRSF18Q9Y5U5 241 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 LY96Q9Y6Y9 160 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 PCLOQ9Y6V0 5065 aa8.33□□□□□ -1.08
SSR1-205ENST00000475213 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 FABP5P3A8MUU1 101 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 FHITP49789 147 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 ZNF345Q14585 488 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 SH2D6Q7Z4S9 175 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 KCNRGQ8N5I3 272 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 NHLRC2Q8NBF2 726 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 OR11H4Q8NGC9 324 aa8.32□□□□□ -1.08
SSR1-205ENST00000475213 TRAV9-2A0A087WT02 112 aa8.31□□□□□ -1.08
SSR1-205ENST00000475213 CIDEAO60543 219 aa8.31□□□□□ -1.08
SSR1-205ENST00000475213 DNAH10OSP0CZ25 163 aa8.31□□□□□ -1.08
SSR1-205ENST00000475213 APOBP04114 4563 aaKnown RBP8.31□□□□□ -1.08
SSR1-205ENST00000475213 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 HMSDA8MTL9 139 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 EVI2AP22794 236 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
SSR1-205ENST00000475213 CRIP1P50238 77 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 TIRAPP58753 221 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 RHOHQ15669 191 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 CST9LP1Q5W188 147 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 STOML3Q8TAV4 291 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 ZC2HC1AQ96GY0 325 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 FMC1Q96HJ9 113 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 PRADC1Q9BSG0 188 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 ZFP30Q9Y2G7 519 aa8.3□□□□□ -1.08
SSR1-205ENST00000475213 A0A0D9SG52 128 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 B4DEV8 164 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 K7EP13 123 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 SEC11BP0C7V7 166 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 ASIPP42127 132 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 UBE2G1P62253 170 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 PIK3CD-AS1Q5SR53 167 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
SSR1-205ENST00000475213 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 KRBOX1C9JBD0 128 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 H3BVH4 76 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 BCL2L11O43521 198 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 PAGE4O60829 102 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 SH2D1AO60880 128 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 LTAP01374 205 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 CRYGDP07320 174 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 MGST1P10620 155 aaKnown RBP8.28□□□□□ -1.08
SSR1-205ENST00000475213 LGALSLQ3ZCW2 172 aaPredicted RBP8.28□□□□□ -1.08
SSR1-205ENST00000475213 FAM162BQ5T6X4 162 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 ZNF471Q9BX82 626 aaPredicted RBP8.28□□□□□ -1.08
SSR1-205ENST00000475213 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 PARLQ9H300 379 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 IL36BQ9NZH7 164 aa8.28□□□□□ -1.08
SSR1-205ENST00000475213 IGHV3-38A0A0C4DH36 116 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 TRBV6-1A0A0K0K1D8 114 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 A8MWV9 139 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 UMAD1C9J7I0 102 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 M0R036 132 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 AKR1C3P42330 323 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 ZNF674Q2M3X9 581 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 DNLZQ5SXM8 178 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 ZFP2Q6ZN57 461 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 Q6ZSN1 163 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 FAM213BQ8TBF2 198 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 JPT2Q9H910 190 aa8.27□□□□□ -1.09
SSR1-205ENST00000475213 TRAV8-6A0A0B4J262 113 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 A0A1B0GV50 99 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 GRIFINA4D1Z8 144 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 ARMS2P0C7Q2 107 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms