RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 NHLRC2Q8NBF2 726 aa6.46□□□□□ -1.38
PDPN-204ENST00000475043 TXNDC17Q9BRA2 123 aa6.46□□□□□ -1.38
PDPN-204ENST00000475043 NKX6-2Q9C056 277 aaPredicted RBP6.46□□□□□ -1.38
PDPN-204ENST00000475043 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
PDPN-204ENST00000475043 CYTL1Q9NRR1 136 aa6.46□□□□□ -1.38
PDPN-204ENST00000475043 ARL2-SNX15V9GYD0 113 aa6.46□□□□□ -1.38
PDPN-204ENST00000475043 LOC100131303A0A0U1RQF7 123 aa6.45□□□□□ -1.38
PDPN-204ENST00000475043 FAM74A7A6NL05 159 aa6.45□□□□□ -1.38
PDPN-204ENST00000475043 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
PDPN-204ENST00000475043 LINC00315P59091 139 aa6.45□□□□□ -1.38
PDPN-204ENST00000475043 STOML3Q8TAV4 291 aa6.45□□□□□ -1.38
PDPN-204ENST00000475043 PKD1P98161 4303 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 TRAV9-2A0A087WT02 112 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 PGPEP1LA6NFU8 196 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 FABP5P3A8MUU1 101 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
PDPN-204ENST00000475043 FHITP49789 147 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 UBE2G1P62253 170 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 ZNF345Q14585 488 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 CFAP126Q5VTH2 177 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 CST9LP1Q5W188 147 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 SPATA12Q7Z6I5 190 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 Q86TA4 180 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 KCNRGQ8N5I3 272 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 HIST1H2BAQ96A08 127 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 C9orf85Q96MD7 179 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
PDPN-204ENST00000475043 IGKV3D-20A0A0C4DH25 116 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 A0A0D9SG52 128 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 A0A1B0GV50 99 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 KANTRA0A1W2PQU2 76 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 B4DEV8 164 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 RS1O15537 224 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 RNASE3P12724 160 aaKnown RBP6.43□□□□□ -1.38
PDPN-204ENST00000475043 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
PDPN-204ENST00000475043 ASIPP42127 132 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 ZNF506Q5JVG8 444 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 DPPA3Q6W0C5 159 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 SH2D6Q7Z4S9 175 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 OR11H4Q8NGC9 324 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 FAM213BQ8TBF2 198 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 SFT2D1Q8WV19 159 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 PRADC1Q9BSG0 188 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
PDPN-204ENST00000475043 TNFRSF18Q9Y5U5 241 aa6.43□□□□□ -1.38
PDPN-204ENST00000475043 HMSDA8MTL9 139 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 M0R036 132 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 CIDEAO60543 219 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 PAGE4O60829 102 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 PFDN1O60925 122 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 SEC11BP0C7V7 166 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 EVI2AP22794 236 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 RHOHQ15669 191 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 LGALSLQ3ZCW2 172 aaPredicted RBP6.42□□□□□ -1.38
PDPN-204ENST00000475043 ZC2HC1AQ96GY0 325 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 ZFP30Q9Y2G7 519 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 DNAH17Q9UFH2 4485 aa6.42□□□□□ -1.38
PDPN-204ENST00000475043 TRBV6-4A0A1B0GX49 114 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 UMAD1C9J7I0 102 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 H3BVH4 76 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 BCL2L11O43521 198 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 SH2D1AO60880 128 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
PDPN-204ENST00000475043 AKR1C3P42330 323 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 TCEAL7Q9BRU2 100 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 KIAA1109Q2LD37 5005 aa6.41□□□□□ -1.38
PDPN-204ENST00000475043 PKHD1P08F94 4074 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 TMSB15BA0A087X1C1 80 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 GRIFINA4D1Z8 144 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 A8MWV9 139 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 CRYGDP07320 174 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 ARMS2P0C7Q2 107 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 CRIP1P50238 77 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 KRTAP10-2P60368 255 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 ERVFC1-1P60608 527 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 EIF5AP63241 154 aaKnown RBP6.4□□□□□ -1.38
PDPN-204ENST00000475043 OR10J3Q5JRS4 329 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 FAM162BQ5T6X4 162 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 Q6ZRN7 208 aaPredicted RBP6.4□□□□□ -1.38
PDPN-204ENST00000475043 NFE4Q86UQ8 179 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 PTH2Q96A98 100 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 KRTAP17-1Q9BYP8 105 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 PARLQ9H300 379 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 IL36BQ9NZH7 164 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 MSRB1Q9NZV6 116 aa6.4□□□□□ -1.38
PDPN-204ENST00000475043 TRAV8-6A0A0B4J262 113 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 KRBOX1C9JBD0 128 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 K7EP13 123 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 LTAP01374 205 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 TPT1P13693 172 aaKnown RBP6.39□□□□□ -1.39
PDPN-204ENST00000475043 FAM74A4Q5TZK3 123 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 TMUB2Q71RG4 321 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 SYT8Q8NBV8 401 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms