RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	CXorf51A	A0A1B0GTR3	108 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CTXND1	A0A1B0GTU2	59 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SMIM31	A0A1B0GVY4	71 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV2-29	A2NJV5	120 aa	Predicted RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	HIGD1C	A8MV81	97 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742		J3QRE1	110 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PITX3	O75364	302 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SFT2D2	O95562	160 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MPC2	O95563	127 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV1-16	P04430	117 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCK	P06307	115 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	ACYP1	P07311	99 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	FREM3	P0C091	2139 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CGB3	P0DN86	165 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CGB7	P0DN87	165 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	RNASE2	P10153	161 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SLC25A6	P12236	298 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	ELOF1	P60002	83 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SEC11A	P67812	179 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCL8	P80075	99 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DEFA5	Q01523	94 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MIR22HG	Q0VDD5	57 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	INSL4	Q14641	139 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	HMGN3	Q15651	99 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	KISS1	Q15726	138 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	KRTAP25-1	Q3LHN0	102 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	FAM229B	Q4G0N7	80 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PYY3	Q5JQD4	70 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PSMG4	Q5JS54	123 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	C1orf137	Q5JT78	98 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	C1orf134	Q5TEV5	83 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PATE2	Q6UY27	113 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SMIM5	Q71RC9	77 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	COMMD6	Q7Z4G1	85 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	ADM2	Q7Z4H4	148 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	COA5	Q86WW8	74 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	LYPD6	Q86Y78	171 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00269	Q8N2A0	174 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	C3orf56	Q8N813	242 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q8NAQ8	132 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	FDCSP	Q8NFU4	85 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SMIM4	Q8WVI0	70 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	C10orf82	Q8WW14	230 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	LCN9	Q8WX39	176 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	S100Z	Q8WXG8	99 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	TSLP	Q969D9	159 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DPH3	Q96FX2	82 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00052	Q96N35	136 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DSCR8	Q96T75	97 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRGV9	Q99603	122 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	LIMD2	Q9BT23	127 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	REG4	Q9BYZ8	158 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	WFDC10A	Q9H1F0	79 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PRO1933	Q9H354	126 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	NPVF	Q9HCQ7	196 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DYNLRB1	Q9NP97	96 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	NXT2	Q9NPJ8	142 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SMCO4	Q9NRQ5	59 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CDC42SE1	Q9NRR8	79 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MED9	Q9NWA0	146 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MRPL36	Q9P0J6	103 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	GNG13	Q9P2W3	67 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PRO1854	Q9UHT4	67 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	NDUFA12	Q9UI09	145 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DNAJC15	Q9Y5T4	150 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742		V9GYH0	126 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742		V9GYV3	84 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MCM3AP	O60318	1980 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SCN9A	Q15858	1988 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	COL11A1	P12107	1806 aa	Predicted RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	NUP98	P52948	1817 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	KIAA0100	Q14667	2235 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MPDZ	O75970	2070 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYLK	Q15746	1914 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	ANKRD36B	Q8N2N9	1353 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	AKAP12	Q02952	1782 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	N4BP2	Q86UW6	1770 aa	Predicted RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	CHD3	Q12873	2000 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	A2ML1	A8K2U0	1454 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	COL1A1	P02452	1464 aa	Predicted RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PZP	P20742	1482 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	GAPVD1	Q14C86	1478 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	RPRD2	Q5VT52	1461 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PLEKHH2	Q8IVE3	1493 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SCAF11	Q99590	1463 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	RAPGEF2	Q9Y4G8	1499 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CACNA1S	Q13698	1873 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PI4KA	P42356	2102 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZGRF1	Q86YA3	2104 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	HEATR1	Q9H583	2144 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	PTPRB	P23467	1997 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	TANC2	Q9HCD6	1990 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SYNJ1	O43426	1573 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	XIRP1	Q702N8	1843 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	CPSF1	Q10570	1443 aa	Known RBP	0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	EEA1	Q15075	1411 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	SCAPER	Q9BY12	1400 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	BRWD1	Q9NSI6	2320 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYH1	P12882	1939 aa		0.41	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYH6	P13533	1939 aa		0.41	□□□□□ -2.34

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