RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 IGHV3-16A0A0C4DH30 117 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 K7EMI3 77 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 HLA-DRB4P13762 266 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
USP39-214ENST00000474572 RASL10AQ92737 203 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 SMIM2Q9BVW6 85 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 MRPS16Q9Y3D3 137 aaKnown RBP7.27□□□□□ -1.25
USP39-214ENST00000474572 HLA-DRB4X5D2U9 266 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 POLQO75417 2590 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 EPG5Q9HCE0 2579 aa7.27□□□□□ -1.25
USP39-214ENST00000474572 MUC4Q99102 2169 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 PDZD2O15018 2839 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 IGHV1OR15-1A0A075B7D0 117 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 TRAV26-2A0A0B4J265 109 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 TRAV12-3A0A0B4J271 114 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 TRAV25A0A0B4J276 109 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 hDV102S1A0JD36 115 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 HNRNPA3P51991 378 aaKnown RBP7.26□□□□□ -1.25
USP39-214ENST00000474572 SCGB2A2Q13296 93 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 DEFB114Q30KQ6 69 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 TMEM61Q8N0U2 210 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 CLUHP3Q96NS8 147 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 YAE1D1Q9NRH1 226 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 TIMM8BQ9Y5J9 83 aaPredicted RBP7.26□□□□□ -1.25
USP39-214ENST00000474572 NAV2Q8IVL1 2488 aa7.26□□□□□ -1.25
USP39-214ENST00000474572 H3BMM0 161 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 PPP1R17O96001 155 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 CD7P09564 240 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 DEFB131AP59861 70 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 SUMO2P61956 95 aaKnown RBP7.25□□□□□ -1.25
USP39-214ENST00000474572 LAGE3Q14657 143 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 SPINK13Q1W4C9 94 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 Q6ZN92 141 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 C14orf178Q8N769 122 aaPredicted RBP7.25□□□□□ -1.25
USP39-214ENST00000474572 LINC01006Q8NI28 216 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 RAX2Q96IS3 184 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 SPAG8Q99932 426 aaPredicted RBP7.25□□□□□ -1.25
USP39-214ENST00000474572 MCRIP2Q9BUT9 160 aaKnown RBP7.25□□□□□ -1.25
USP39-214ENST00000474572 ZMAT4Q9H898 229 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 MAP6D1Q9H9H5 199 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 DOPEY2Q9Y3R5 2298 aa7.25□□□□□ -1.25
USP39-214ENST00000474572 TRGV11A0A075B6L2 103 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 TRAV12-2A0A075B6T6 113 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 A0A1B0GV90 55 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 RBMY1BA6NDE4 496 aaKnown RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 RBMY1EA6NEQ0 496 aaKnown RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 SPRY2O43597 315 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 ATP5LO75964 103 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 NDUFA7O95182 113 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 RBMY1DP0C7P1 496 aaKnown RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 RBMY1A1P0DJD3 496 aaKnown RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 RBMY1CP0DJD4 496 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 FXYD7P58549 80 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 HILS1P60008 231 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 NUTF2P61970 127 aaKnown RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 RBMY1FQ15415 496 aaKnown RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 DYNLRB2Q8TF09 96 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 DUX3Q96PT4 197 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 LINC00467Q9BRT7 94 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 ZNF256Q9Y2P7 627 aaPredicted RBP7.24□□□□□ -1.25
USP39-214ENST00000474572 GOLT1BQ9Y3E0 138 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 ZANQ9Y493 2812 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 TENM4Q6N022 2769 aa7.24□□□□□ -1.25
USP39-214ENST00000474572 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 KNCNA6PVL3 124 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 IGKV3-20P01619 116 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 CD28P10747 220 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 ODF1Q14990 250 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 ORMDL2Q53FV1 153 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 KHDC1LQ5JSQ8 128 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 Q8N1Y9 231 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 SYT8Q8NBV8 401 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 EDA2RQ9HAV5 297 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 MDFICQ9P1T7 246 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 TSSC4Q9Y5U2 329 aaPredicted RBP7.23□□□□□ -1.25
USP39-214ENST00000474572 CREBBPQ92793 2442 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 ITPR3Q14573 2671 aa7.23□□□□□ -1.25
USP39-214ENST00000474572 H0Y8G0 127 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 CCL24O00175 119 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 MGPP08493 103 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 SMIM17P0DL12 118 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 COX8AP10176 69 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 POLR2KP53803 58 aaKnown RBP7.22□□□□□ -1.25
USP39-214ENST00000474572 CD300EQ496F6 205 aaPredicted RBP7.22□□□□□ -1.25
USP39-214ENST00000474572 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 SLC25A34Q6PIV7 304 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 ZNF418Q8TF45 676 aaPredicted RBP7.22□□□□□ -1.25
USP39-214ENST00000474572 PTH2Q96A98 100 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 RPL39LQ96EH5 51 aaKnown RBP7.22□□□□□ -1.25
USP39-214ENST00000474572 PMCHL2Q9BQD1 86 aa7.22□□□□□ -1.25
USP39-214ENST00000474572 ANK3Q12955 4377 aaKnown RBP7.22□□□□□ -1.25
USP39-214ENST00000474572 ABCA12Q86UK0 2595 aa7.21□□□□□ -1.25
USP39-214ENST00000474572 TCAPO15273 167 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 CRYGDP07320 174 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 FGF6P10767 208 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
USP39-214ENST00000474572 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms