RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 IGKV1-17P01599 117 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 ODF1Q14990 250 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 DEFB136Q30KP8 78 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 OCIAD2Q56VL3 154 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 LGALS9CQ6DKI2 356 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 Q8N6K4 173 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SPATA3Q8NHX4 192 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 NRGNQ92686 78 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SPANXCQ9NY87 97 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 HEATR1Q9H583 2144 aaKnown RBP3.53□□□□□ -1.84
CCNL1-215ENST00000474539 A0A0G2JRQ6 117 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SMIM27A0A1W2PRY6 76 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 WIPF3A6NGB9 483 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 IGKV1-39P01597 117 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 IGKV1D-39P04432 117 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 FUSP35637 526 aaKnown RBP eCLIP3.53□□□□□ -1.84
CCNL1-215ENST00000474539 CFHR3Q02985 330 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SAMD5Q5TGI4 173 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 ORAOV1Q8WV07 137 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 TIMM17AQ99595 171 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SPTBN5Q9NRC6 3674 aaKnown RBP3.53□□□□□ -1.84
CCNL1-215ENST00000474539 F8VRH5 84 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SOCS3O14543 225 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 SIVA1O15304 175 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 IGLV1-40P01703 118 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 IGLL1P15814 213 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 AMTNQ6UX39 209 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 CCDC140Q96MF4 163 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 FNDC4Q9H6D8 234 aaPredicted RBP3.53□□□□□ -1.84
CCNL1-215ENST00000474539 DMRT1Q9Y5R6 373 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 KIF26BQ2KJY2 2108 aa3.53□□□□□ -1.84
CCNL1-215ENST00000474539 A0A0J9YY99 117 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 TRAV12-2A0A075B6T6 113 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 TRAV26-1A0A087WT03 109 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 IGKV3D-20A0A0C4DH25 116 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 CRYGBP07316 175 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 CRYGDP07320 174 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 HLA-DMBP28068 263 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 TMEM95Q3KNT9 176 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 APRG1Q8IVJ8 170 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 PCDH15Q96QU1 1955 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 LAMA2P24043 3122 aaKnown RBP3.52□□□□□ -1.85
CCNL1-215ENST00000474539 FREM3P0C091 2139 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 ESDP10768 282 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
CCNL1-215ENST00000474539 LELP1Q5T871 98 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 MORN5Q5VZ52 161 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 SSBP4Q9BWG4 385 aaPredicted RBP3.52□□□□□ -1.85
CCNL1-215ENST00000474539 Q9HAA7 133 aa3.52□□□□□ -1.85
CCNL1-215ENST00000474539 NCKAP5O14513 1909 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 SERF1AO75920 110 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 DIAPH2-AS1Q14236 149 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 DYNAPQ8N1N2 210 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 DEFB125Q8N687 156 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 DSCR8Q96T75 97 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 hDV102S1A0JD36 115 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
CCNL1-215ENST00000474539 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 TRAV12-1A0A0B4J245 112 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 IGHV3-16A0A0C4DH30 117 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 SPAG11BQ08648 103 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 MPV17L2Q567V2 206 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 LINC00467Q9BRT7 94 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 PLXNB3Q9ULL4 1909 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 DNAJC13O75165 2243 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 SDK2Q58EX2 2172 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 MUC21A0A0G2JKD1 596 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 MUC21A0A140T8X8 626 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 COX7B2Q8TF08 81 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
CCNL1-215ENST00000474539 CTRLP40313 264 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 FAM222AQ5U5X8 452 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 Q8N2B8 174 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 PTH2Q96A98 100 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 SCRT2Q9NQ03 307 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 SS18L2Q9UHA2 77 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 NCOR1O75376 2440 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 RS1O15537 224 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 FHL3Q13643 280 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 ZNF295-AS1Q8N0V1 137 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 ZNF664Q8N3J9 261 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 FGF23Q9GZV9 251 aaPredicted RBP3.5□□□□□ -1.85
CCNL1-215ENST00000474539 CHD3Q12873 2000 aaKnown RBP3.5□□□□□ -1.85
CCNL1-215ENST00000474539 ADAMTS20P59510 1910 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 ALPK3Q96L96 1907 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 SYS1-DBNDD2H3BUS1 97 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 TRBV12-3P01733 135 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 UBE2D1P51668 147 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 MLANAQ16655 118 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 HTTP42858 3142 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 CEP192Q8TEP8 1941 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 TMEM213A2RRL7 107 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 IGLC2P0DOY2 106 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 VSIG2Q96IQ7 327 aa3.5□□□□□ -1.85
CCNL1-215ENST00000474539 LRP4O75096 1905 aa3.49□□□□□ -1.85
CCNL1-215ENST00000474539 DIDO1Q9BTC0 2240 aaKnown RBP3.49□□□□□ -1.85
CCNL1-215ENST00000474539 IGHV3-30P01768 117 aa3.49□□□□□ -1.85
CCNL1-215ENST00000474539 IGHV3-33P01772 117 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms