RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ODF1Q14990 250 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 ANAPC13Q9BS18 74 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 NDFIP1Q9BT67 221 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 U3KQE9 123 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 E9PLD3 99 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
LMNA-213ENST00000473598 CD28P10747 220 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 PROK1P58294 105 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 GNG5P63218 68 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 KLF12Q9Y4X4 402 aa11.25□□□□□ -0.61
LMNA-213ENST00000473598 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
LMNA-213ENST00000473598 HIGD1BQ9P298 99 aa11.24□□□□□ -0.61
LMNA-213ENST00000473598 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
LMNA-213ENST00000473598 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
LMNA-213ENST00000473598 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 ZNF747Q9BV97 191 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 CDIP1Q9H305 208 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 Q9H3A6 140 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 A0A1B0GW15 77 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
LMNA-213ENST00000473598 H3BTX0 84 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 CAMPP49913 170 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 KRTAP21-3Q3LHN1 58 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 ETDBQ3ZM63 59 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 HIST2H2BDQ6DRA6 164 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
LMNA-213ENST00000473598 PHLDA1Q8WV24 401 aaPredicted RBP11.23□□□□□ -0.61
LMNA-213ENST00000473598 IGHV3OR16-13A0A075B7E8 117 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 IGHV3-74A0A0B4J1X5 117 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 K7EMT4 169 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
LMNA-213ENST00000473598 DEFB136Q30KP8 78 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 LGALS9BQ3B8N2 356 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 LGALS9CQ6DKI2 356 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 DAZ1Q9NQZ3 744 aaKnown RBP11.22□□□□□ -0.61
LMNA-213ENST00000473598 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
LMNA-213ENST00000473598 IGHV3-66A0A0C4DH42 116 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 LINC01619G3V211 115 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 CSN1S1P47710 185 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 GAGE13Q4V321 117 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 Q6ZUT4 128 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
LMNA-213ENST00000473598 MCRIP2Q9BUT9 160 aaKnown RBP11.21□□□□□ -0.61
LMNA-213ENST00000473598 VCX2Q9H322 139 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 OTORQ9NRC9 128 aa11.21□□□□□ -0.61
LMNA-213ENST00000473598 TRBV19A0A075B6N1 114 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 LGALS9O00182 355 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 TCRAP04437 139 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 CT45A10P0DMU9 189 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 TM4SF20Q53R12 229 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 C17orf77Q96MU5 243 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.62
LMNA-213ENST00000473598 IGHV7-4-1A0A0J9YVY3 117 aa11.2□□□□□ -0.62
LMNA-213ENST00000473598 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
LMNA-213ENST00000473598 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
LMNA-213ENST00000473598 PRO0461Q9UI25 63 aa11.2□□□□□ -0.62
LMNA-213ENST00000473598 DNHD1Q96M86 4753 aa11.2□□□□□ -0.62
LMNA-213ENST00000473598 ANK2Q01484 3957 aa11.2□□□□□ -0.62
LMNA-213ENST00000473598 B5MCH6 92 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 SYNJ2BPP57105 145 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 PDE6HQ13956 83 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 CT83Q5H943 113 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 TM2D2Q9BX73 214 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 C1QTNF4Q9BXJ3 329 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 A8MWL6 223 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 SLURP1P55000 103 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 FOXI1Q12951 378 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 SYT8Q8NBV8 401 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 C18orf15Q96N68 181 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 C20orf78Q9BR46 151 aa11.19□□□□□ -0.62
LMNA-213ENST00000473598 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 APOMO95445 188 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 LTAP01374 205 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 MT-ATP8P03928 68 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 DUX3Q96PT4 197 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 IGLL5B9A064 214 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 CHEK1O14757 476 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 NCR2O95944 276 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 EDN2P20800 178 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 SMIM20Q8N5G0 67 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 SPXQ9BT56 116 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 RHPN1-AS1Q9BWJ2 59 aa11.18□□□□□ -0.62
LMNA-213ENST00000473598 GCSHP23434 173 aa11.17□□□□□ -0.62
LMNA-213ENST00000473598 KRTAP10-3P60369 221 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms