RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 TPT1P13693 172 aaKnown RBP4.12□□□□□ -1.75
RTF1-203ENST00000473214 SLC25A16P16260 332 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 LYZP61626 148 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 PEA15Q15121 130 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 OR2T2Q6IF00 324 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 C9orf47Q6ZRZ4 202 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 C14orf178Q8N769 122 aaPredicted RBP4.12□□□□□ -1.75
RTF1-203ENST00000473214 DIRC1Q969H9 104 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 VGLL1Q99990 258 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 DEFB126Q9BYW3 111 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 C11orf1Q9H5F2 150 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 DOCK9Q9BZ29 2069 aa4.12□□□□□ -1.75
RTF1-203ENST00000473214 A0A1W2PP18 115 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 SLC25A20O43772 301 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 MRPS14O60783 128 aaKnown RBP4.11□□□□□ -1.75
RTF1-203ENST00000473214 TLX1NBP0CAT3 122 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 IGHV3-30-3P0DP02 117 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 CCL3P10147 92 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 IQCJQ1A5X6 159 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 C11orf87Q6NUJ2 197 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 ADM2Q7Z4H4 148 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 C10orf111Q8N326 155 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 SIGLECL1Q8N7X8 197 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 OR5AK2Q8NH90 309 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 BCL2L10Q9HD36 194 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 SCRT2Q9NQ03 307 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 TMEM106BQ9NUM4 274 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 APCP25054 2843 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 SCN8AQ9UQD0 1980 aa4.11□□□□□ -1.75
RTF1-203ENST00000473214 MED13LQ71F56 2210 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 TRGV5A0A0B4J1U4 118 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 MUC21A0A0G2JKD1 596 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 A0A1B0GUV1 79 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 G3V3Q6 166 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 H3BQ15 152 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 IGHV1-69P01742 117 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 HLA-DQA1P01909 254 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 TRGV3P03979 118 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 PCBD1P61457 104 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 CDK5R1Q15078 307 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 ZNF322Q6U7Q0 402 aaPredicted RBP4.1□□□□□ -1.75
RTF1-203ENST00000473214 CEND1Q8N111 149 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 FAM216BQ8N7L0 139 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 CNEP1R1Q8N9A8 125 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 CIRBP-AS1Q8TBR5 109 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 C16orf74Q96GX8 76 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 LINC00312Q9Y6C7 94 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 CROCCQ5TZA2 2017 aa4.1□□□□□ -1.75
RTF1-203ENST00000473214 RAI1Q7Z5J4 1906 aaPredicted RBP4.09□□□□□ -1.75
RTF1-203ENST00000473214 TDRD6O60522 2096 aaKnown RBP4.09□□□□□ -1.75
RTF1-203ENST00000473214 RP1P56715 2156 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 SHANK1Q9Y566 2161 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 IGHV1-3A0A0C4DH29 117 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 C7orf66A4D0T2 115 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 FAM24AA6NFZ4 105 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 ZFP92A6NM28 416 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 A8MWP4 228 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 C3orf84H3BNL1 204 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 IGKV1D-33P01593 117 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 IGKV1-33P01594 117 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 MT-ATP8P03928 68 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 CD3DP04234 171 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 FUSP35637 526 aaKnown RBP eCLIP4.09□□□□□ -1.75
RTF1-203ENST00000473214 BLCAPP62952 87 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 EBI3Q14213 229 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 MIC13Q5XKP0 118 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 ZFP2Q6ZN57 461 aa4.09□□□□□ -1.75
RTF1-203ENST00000473214 LSM10Q969L4 123 aaKnown RBP4.09□□□□□ -1.75
RTF1-203ENST00000473214 RPL26L1Q9UNX3 145 aaKnown RBP4.09□□□□□ -1.75
RTF1-203ENST00000473214 NYNRINQ9P2P1 1898 aaKnown RBP4.09□□□□□ -1.76
RTF1-203ENST00000473214 SPG11Q96JI7 2443 aa4.09□□□□□ -1.76
RTF1-203ENST00000473214 IGKV3D-20A0A0C4DH25 116 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 M0R2P5 195 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 YPEL1O60688 119 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 SH2D1AO60880 128 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 PITX3O75364 302 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 IGHV1-46P01743 117 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 IGKV2-30P06310 120 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 SLC25A4P12235 298 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 DCDP81605 110 aaKnown RBP4.08□□□□□ -1.76
RTF1-203ENST00000473214 MRPS36P82909 103 aaKnown RBP4.08□□□□□ -1.76
RTF1-203ENST00000473214 CIRBPQ14011 172 aaKnown RBP4.08□□□□□ -1.76
RTF1-203ENST00000473214 Q1RN00 199 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 HIVEP3Q5T1R4 2406 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 C16orf47Q6ZP98 133 aaPredicted RBP4.08□□□□□ -1.76
RTF1-203ENST00000473214 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 C3orf56Q8N813 242 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 C15orf56Q8N910 161 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 Q8N976 141 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 S100A13Q99584 98 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 LITAFQ99732 161 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 NPVFQ9HCQ7 196 aa4.08□□□□□ -1.76
RTF1-203ENST00000473214 DOCK7Q96N67 2140 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 DSCAML1Q8TD84 2053 aa4.07□□□□□ -1.76
RTF1-203ENST00000473214 ZNF736B4DX44 427 aaPredicted RBP4.07□□□□□ -1.76
RTF1-203ENST00000473214 EDF1O60869 148 aaKnown RBP4.07□□□□□ -1.76
RTF1-203ENST00000473214 APOC3P02656 99 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms