RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 RBMY1EA6NEQ0 496 aaKnown RBP10.75□□□□□ -0.69
HIF3A-206ENST00000472815 CRXO43186 299 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-206ENST00000472815 RBMY1DP0C7P1 496 aaKnown RBP10.75□□□□□ -0.69
HIF3A-206ENST00000472815 ALKBH7Q9BT30 221 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-206ENST00000472815 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
HIF3A-206ENST00000472815 CBY3A6NI87 242 aa10.75□□□□□ -0.69
HIF3A-206ENST00000472815 RNASE3P12724 160 aaKnown RBP10.75□□□□□ -0.69
HIF3A-206ENST00000472815 DMRTA1Q5VZB9 504 aa10.75□□□□□ -0.69
HIF3A-206ENST00000472815 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
HIF3A-206ENST00000472815 SYT8Q8NBV8 401 aa10.75□□□□□ -0.69
HIF3A-206ENST00000472815 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
HIF3A-206ENST00000472815 M0R381 172 aa10.74□□□□□ -0.69
HIF3A-206ENST00000472815 PPBPP02775 128 aa10.74□□□□□ -0.69
HIF3A-206ENST00000472815 Q8N1Y9 231 aa10.74□□□□□ -0.69
HIF3A-206ENST00000472815 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 ORMDL3Q8N138 153 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 HIST3H2BBQ8N257 126 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 C18orf32Q8TCD1 76 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 AP1S3Q96PC3 154 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 TMEM208Q9BTX3 173 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 C19orf73Q9NVV2 129 aa10.73□□□□□ -0.69
HIF3A-206ENST00000472815 AKR1D1P51857 326 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 TMEM18Q96B42 140 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 LINC01587Q99440 93 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 MSRB1Q9NZV6 116 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 XCL2Q9UBD3 114 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 WIPF1O43516 503 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 NXPH4O95158 308 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 SMIM17P0DL12 118 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 CKS2P33552 79 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 LAMTOR2Q9Y2Q5 125 aa10.72□□□□□ -0.69
HIF3A-206ENST00000472815 ZNF415Q09FC8 603 aa10.71□□□□□ -0.69
HIF3A-206ENST00000472815 MRPL51Q4U2R6 128 aaKnown RBP10.71□□□□□ -0.69
HIF3A-206ENST00000472815 PDZD11Q5EBL8 140 aa10.71□□□□□ -0.69
HIF3A-206ENST00000472815 DPH3P1Q9H4G8 78 aa10.71□□□□□ -0.69
HIF3A-206ENST00000472815 GOLT1BQ9Y3E0 138 aa10.71□□□□□ -0.69
HIF3A-206ENST00000472815 ESDP10768 282 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 HTN1P15515 57 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 RAB4AP20338 218 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 PRELID3AQ96N28 172 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 ZMAT5Q9UDW3 170 aaKnown RBP10.7□□□□□ -0.7
HIF3A-206ENST00000472815 TP53TG3Q9ULZ0 132 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 U3KQK5 164 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 D6R8Y8 96 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 SERF1AO75920 110 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
HIF3A-206ENST00000472815 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 EVI2AP22794 236 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 RBMY1FQ15415 496 aaKnown RBP10.7□□□□□ -0.7
HIF3A-206ENST00000472815 MDFICQ9P1T7 246 aa10.7□□□□□ -0.7
HIF3A-206ENST00000472815 FABP4P15090 132 aa10.69□□□□□ -0.7
HIF3A-206ENST00000472815 IGLL1P15814 213 aa10.69□□□□□ -0.7
HIF3A-206ENST00000472815 RPL35AP18077 110 aaKnown RBP10.69□□□□□ -0.7
HIF3A-206ENST00000472815 MRAP2Q96G30 205 aa10.69□□□□□ -0.7
HIF3A-206ENST00000472815 SAMD10Q9BYL1 202 aa10.69□□□□□ -0.7
HIF3A-206ENST00000472815 WFDC10AQ9H1F0 79 aa10.69□□□□□ -0.7
HIF3A-206ENST00000472815 PIK3CD-AS1Q5SR53 167 aa10.68□□□□□ -0.7
HIF3A-206ENST00000472815 DEFB125Q8N687 156 aa10.68□□□□□ -0.7
HIF3A-206ENST00000472815 SPATA3Q8NHX4 192 aa10.68□□□□□ -0.7
HIF3A-206ENST00000472815 SPXQ9BT56 116 aa10.68□□□□□ -0.7
HIF3A-206ENST00000472815 ANK2Q01484 3957 aa10.68□□□□□ -0.7
HIF3A-206ENST00000472815 HSBP1O75506 76 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 PRR31Q5SQ13 230 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 CHCHD1Q96BP2 118 aaKnown RBP10.67□□□□□ -0.7
HIF3A-206ENST00000472815 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 PACRGQ96M98 296 aaPredicted RBP10.67□□□□□ -0.7
HIF3A-206ENST00000472815 HIST1H2BLQ99880 126 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 PPP1R17O96001 155 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
HIF3A-206ENST00000472815 RCHY1Q96PM5 261 aa10.67□□□□□ -0.7
HIF3A-206ENST00000472815 MUC4Q99102 2169 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 IGHV3OR16-12A0A075B7B8 117 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 M0R2P5 195 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-206ENST00000472815 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 PTH2Q96A98 100 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 NDUFAF3Q9BU61 184 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 MAP1LC3AQ9H492 121 aa10.66□□□□□ -0.7
HIF3A-206ENST00000472815 LINC00614P0C842 121 aa10.65□□□□□ -0.7
HIF3A-206ENST00000472815 PMCHP20382 165 aa10.65□□□□□ -0.7
HIF3A-206ENST00000472815 FA2HQ7L5A8 372 aa10.65□□□□□ -0.7
HIF3A-206ENST00000472815 NIT1Q86X76 327 aa10.65□□□□□ -0.7
HIF3A-206ENST00000472815 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.7
HIF3A-206ENST00000472815 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 MGPP08493 103 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 AMTP48728 403 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
HIF3A-206ENST00000472815 GSN-AS1Q9NRJ2 163 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 NOTCH3Q9UM47 2321 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 A8MWV9 139 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 NCR2O95944 276 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 APOC4P55056 127 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 LINC00310P59036 64 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
HIF3A-206ENST00000472815 AP5S1Q9NUS5 200 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms