RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 MAPK1IP1LQ8NDC0 245 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 OR9G4Q8NGQ1 327 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 C4orf3Q8WVX3 66 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 TMEM158Q8WZ71 300 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 SMIM2Q9BVW6 85 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 DOPEY1Q5JWR5 2465 aa5.72□□□□□ -1.49
CCDC171-205ENST00000472806 IGLV2-18A0A075B6J9 118 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 TRGV11A0A075B6L2 103 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 F6UB75 175 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.71□□□□□ -1.5
CCDC171-205ENST00000472806 DPM2O94777 84 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 NUDT3O95989 172 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 MGPP08493 103 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 ZNF688P0C7X2 276 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 ZNF25P17030 456 aaPredicted RBP5.71□□□□□ -1.5
CCDC171-205ENST00000472806 SRD5A1P18405 259 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 CDKN1BP46527 198 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 HINT1P49773 126 aaPredicted RBP5.71□□□□□ -1.5
CCDC171-205ENST00000472806 POM121L12Q8N7R1 296 aa5.71□□□□□ -1.5
CCDC171-205ENST00000472806 IGHV1OR15-1A0A075B7D0 117 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 TRAV12-1A0A0B4J245 112 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 IGKCP01834 107 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 CD7P09564 240 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 HLA-DRB4P13762 266 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 PLNP26678 52 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 TFPI2P48307 235 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 KRTAP10-9P60411 292 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 TCTEX1D4Q5JR98 221 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 ORAOV1Q8WV07 137 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 DUX5Q96PT3 197 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 HLA-DRB4X5D2U9 266 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 CACNA1BQ00975 2339 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 MED13LQ71F56 2210 aa5.7□□□□□ -1.5
CCDC171-205ENST00000472806 CHD8Q9HCK8 2581 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 TRAV12-3A0A0B4J271 114 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 GNRH2O43555 120 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 CD5LO43866 347 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 RNASE3P12724 160 aaKnown RBP5.69□□□□□ -1.5
CCDC171-205ENST00000472806 GATA1P15976 413 aaPredicted RBP5.69□□□□□ -1.5
CCDC171-205ENST00000472806 SEC11AP67812 179 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 ODF1Q14990 250 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 TMEM97Q5BJF2 176 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 C10orf99Q6UWK7 81 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 BOD1L2Q8IYS8 172 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 C14orf178Q8N769 122 aaPredicted RBP5.69□□□□□ -1.5
CCDC171-205ENST00000472806 STPG4Q8N801 248 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 DYNLRB2Q8TF09 96 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 FOXC2Q99958 501 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 ZMAT4Q9H898 229 aa5.69□□□□□ -1.5
CCDC171-205ENST00000472806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC171-205ENST00000472806 SMG1Q96Q15 3661 aaKnown RBP5.68□□□□□ -1.5
CCDC171-205ENST00000472806 AKAP6Q13023 2319 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 PRRC2AP48634 2157 aaKnown RBP5.68□□□□□ -1.5
CCDC171-205ENST00000472806 A0A087WX48 190 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 TRAV26-2A0A0B4J265 109 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 TRAV25A0A0B4J276 109 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 IGHV3-16A0A0C4DH30 117 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 H7C1H1 209 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 VCYO14598 125 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
CCDC171-205ENST00000472806 FXYD7P58549 80 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 DEFB1P60022 68 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 HSD52Q0P140 79 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 KHDC1LQ5JSQ8 128 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 BVES-AS1Q5T3Y7 98 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 RASL10AQ92737 203 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 C9orf85Q96MD7 179 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 TMEM208Q9BTX3 173 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 MCRIP2Q9BUT9 160 aaKnown RBP5.68□□□□□ -1.5
CCDC171-205ENST00000472806 KALRNO60229 2985 aa5.68□□□□□ -1.5
CCDC171-205ENST00000472806 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 A6NDN8 102 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 A8MTW9 85 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 F5H697 171 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 J3QKU1 62 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 GAS8-AS1O95177 125 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 EDN2P20800 178 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 NMUP48645 174 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 ANKRD39Q53RE8 183 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 MPV17L2Q567V2 206 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 PAPPA-AS1Q5QFB9 102 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 PIK3CD-AS1Q5SR53 167 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 Q6ZQT7 251 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 OR11H1Q8NG94 326 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 RAX2Q96IS3 184 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 JMJD8Q96S16 334 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 SPAG8Q99932 426 aaPredicted RBP5.67□□□□□ -1.5
CCDC171-205ENST00000472806 DKK2Q9UBU2 259 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 CYSLTR1Q9Y271 337 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 COX11Q9Y6N1 276 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 KIF25-AS1Q9Y6Z4 181 aa5.67□□□□□ -1.5
CCDC171-205ENST00000472806 CR1P17927 2039 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 CBY3A6NI87 242 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 F8VRH5 84 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 FGF6P10767 208 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms