RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 MUC4Q99102 2169 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 TMSB15BA0A087X1C1 80 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 TRAV4A0A0B4J268 109 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 GRIFINA4D1Z8 144 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 F5H768 121 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 H3BVH4 76 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 HTN3P15516 51 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 SLAQ13239 276 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 UQCC3Q6UW78 93 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 SYT8Q8NBV8 401 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 NUDT10Q8NFP7 164 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 OR2D3Q8NGH3 330 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 NUDT11Q96G61 164 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 SSBP4Q9BWG4 385 aaPredicted RBP14.09□□□□□ -0.15
SF1-213ENST00000472725 NAT8Q9UHE5 227 aa14.09□□□□□ -0.15
SF1-213ENST00000472725 IGLL5B9A064 214 aa14.08□□□□□ -0.16
SF1-213ENST00000472725 OR5AL1P0C617 328 aa14.08□□□□□ -0.16
SF1-213ENST00000472725 RPL19P84098 196 aaKnown RBP14.08□□□□□ -0.16
SF1-213ENST00000472725 PHLDA3Q9Y5J5 127 aa14.08□□□□□ -0.16
SF1-213ENST00000472725 IGHV4-4A0A075B6R2 117 aa14.07□□□□□ -0.16
SF1-213ENST00000472725 H3BNG1 76 aa14.07□□□□□ -0.16
SF1-213ENST00000472725 SNAI2O43623 268 aa14.07□□□□□ -0.16
SF1-213ENST00000472725 A8MWV9 139 aa14.06□□□□□ -0.16
SF1-213ENST00000472725 ZFP82Q8N141 532 aa14.06□□□□□ -0.16
SF1-213ENST00000472725 C15orf53Q8NAA6 179 aa14.06□□□□□ -0.16
SF1-213ENST00000472725 OR4C5Q8NGB2 326 aa14.06□□□□□ -0.16
SF1-213ENST00000472725 RPP21Q9H633 154 aaKnown RBP14.06□□□□□ -0.16
SF1-213ENST00000472725 A0A1W2PPQ1 181 aa14.05□□□□□ -0.16
SF1-213ENST00000472725 F2Z2F3 143 aa14.05□□□□□ -0.16
SF1-213ENST00000472725 ERVFC1-1P60608 527 aa14.05□□□□□ -0.16
SF1-213ENST00000472725 CT83Q5H943 113 aa14.05□□□□□ -0.16
SF1-213ENST00000472725 RNASE7Q9H1E1 156 aaKnown RBP14.05□□□□□ -0.16
SF1-213ENST00000472725 OSTCQ9NRP0 149 aa14.05□□□□□ -0.16
SF1-213ENST00000472725 APLNQ9ULZ1 77 aa14.05□□□□□ -0.16
SF1-213ENST00000472725 RS1O15537 224 aa14.04□□□□□ -0.16
SF1-213ENST00000472725 GATCO43716 136 aaKnown RBP14.04□□□□□ -0.16
SF1-213ENST00000472725 IGLC6P0CF74 106 aa14.04□□□□□ -0.16
SF1-213ENST00000472725 HOXA5P20719 270 aa14.04□□□□□ -0.16
SF1-213ENST00000472725 TMEM88Q6PEY1 159 aa14.04□□□□□ -0.16
SF1-213ENST00000472725 POM121L12Q8N7R1 296 aa14.04□□□□□ -0.16
SF1-213ENST00000472725 NXPH4O95158 308 aa14.03□□□□□ -0.16
SF1-213ENST00000472725 SFTA3P0C7M3 94 aa14.03□□□□□ -0.16
SF1-213ENST00000472725 RPL23P62829 140 aaKnown RBP14.03□□□□□ -0.16
SF1-213ENST00000472725 ZFP2Q6ZN57 461 aa14.03□□□□□ -0.16
SF1-213ENST00000472725 C15orf54Q8N8G6 183 aa14.03□□□□□ -0.16
SF1-213ENST00000472725 FER1L6-AS1Q8NA97 138 aa14.03□□□□□ -0.16
SF1-213ENST00000472725 PRO0255Q9UI72 69 aa14.03□□□□□ -0.16
SF1-213ENST00000472725 TRGV4A0A0C4DH28 118 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 LINC00862A6NCI5 91 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 A8MWL6 223 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 FHL2Q14192 279 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 CFAP126Q5VTH2 177 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 DMRTA1Q5VZB9 504 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 ISOC2Q96AB3 205 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 ZNF479Q96JC4 524 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 CSMD3Q7Z407 3707 aa14.02□□□□□ -0.17
SF1-213ENST00000472725 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
SF1-213ENST00000472725 CACNG7P62955 275 aa14.01□□□□□ -0.17
SF1-213ENST00000472725 WDR73Q6P4I2 378 aa14.01□□□□□ -0.17
SF1-213ENST00000472725 HHLA3Q9XRX5 114 aa14.01□□□□□ -0.17
SF1-213ENST00000472725 NACAE9PAV3 2078 aa14□□□□□ -0.17
SF1-213ENST00000472725 TRAV26-1A0A087WT03 109 aa14□□□□□ -0.17
SF1-213ENST00000472725 FAM231BA6NCW3 169 aa14□□□□□ -0.17
SF1-213ENST00000472725 M0R381 172 aa14□□□□□ -0.17
SF1-213ENST00000472725 RHODO00212 210 aa14□□□□□ -0.17
SF1-213ENST00000472725 PNRC1Q12796 327 aaPredicted RBP14□□□□□ -0.17
SF1-213ENST00000472725 ADIRFQ15847 76 aa14□□□□□ -0.17
SF1-213ENST00000472725 SPANXN1Q5VSR9 72 aa14□□□□□ -0.17
SF1-213ENST00000472725 SFRP2Q96HF1 295 aa14□□□□□ -0.17
SF1-213ENST00000472725 GZMBP10144 247 aa13.99□□□□□ -0.17
SF1-213ENST00000472725 CRYBA4P53673 196 aa13.99□□□□□ -0.17
SF1-213ENST00000472725 OR10AG1Q8NH19 301 aa13.99□□□□□ -0.17
SF1-213ENST00000472725 GFRA4Q9GZZ7 299 aa13.99□□□□□ -0.17
SF1-213ENST00000472725 PAX4O43316 350 aa13.98□□□□□ -0.17
SF1-213ENST00000472725 CTRLP40313 264 aa13.98□□□□□ -0.17
SF1-213ENST00000472725 FOXA3P55318 350 aaPredicted RBP13.98□□□□□ -0.17
SF1-213ENST00000472725 COMMD7Q86VX2 200 aa13.98□□□□□ -0.17
SF1-213ENST00000472725 CNFNQ9BYD5 112 aa13.98□□□□□ -0.17
SF1-213ENST00000472725 TRBV6-4A0A1B0GX49 114 aa13.97□□□□□ -0.17
SF1-213ENST00000472725 GATA1P15976 413 aaPredicted RBP13.97□□□□□ -0.17
SF1-213ENST00000472725 LGALS9CQ6DKI2 356 aa13.97□□□□□ -0.17
SF1-213ENST00000472725 OR10G8Q8NGN5 311 aa13.97□□□□□ -0.17
SF1-213ENST00000472725 TSKUQ8WUA8 353 aa13.97□□□□□ -0.17
SF1-213ENST00000472725 VSIG2Q96IQ7 327 aa13.97□□□□□ -0.17
SF1-213ENST00000472725 TMEM218A2RU14 115 aa13.96□□□□□ -0.17
SF1-213ENST00000472725 UFSP1Q6NVU6 142 aa13.96□□□□□ -0.17
SF1-213ENST00000472725 LYZL1Q6UWQ5 148 aa13.96□□□□□ -0.17
SF1-213ENST00000472725 TPPP3Q9BW30 176 aa13.96□□□□□ -0.17
SF1-213ENST00000472725 V9GYV3 84 aa13.96□□□□□ -0.17
SF1-213ENST00000472725 A0A0J9YY99 117 aa13.95□□□□□ -0.18
SF1-213ENST00000472725 P0DMU3 169 aa13.95□□□□□ -0.18
SF1-213ENST00000472725 FAM231AP0DMU4 169 aa13.95□□□□□ -0.18
SF1-213ENST00000472725 FAM231CP0DMU5 169 aa13.95□□□□□ -0.18
SF1-213ENST00000472725 AP1S3Q96PC3 154 aa13.95□□□□□ -0.18
SF1-213ENST00000472725 TENM2Q9NT68 2774 aa13.94□□□□□ -0.18
SF1-213ENST00000472725 LCE6AA0A183 80 aa13.94□□□□□ -0.18
SF1-213ENST00000472725 CRYGDP07320 174 aa13.94□□□□□ -0.18
SF1-213ENST00000472725 GTSF1Q8WW33 167 aa13.94□□□□□ -0.18
SF1-213ENST00000472725 LINC00476Q8WZB0 136 aa13.94□□□□□ -0.18
SF1-213ENST00000472725 ICOSQ9Y6W8 199 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms