RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 C11orf68Q9H3H3 251 aaKnown RBP7.01□□□□□ -1.29
SF3A1-207ENST00000471342 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 GOLT1BQ9Y3E0 138 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 DNAH1Q9P2D7 4330 aa7.01□□□□□ -1.29
SF3A1-207ENST00000471342 VPS13DQ5THJ4 4388 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 MUC21A0A0G2JKD1 596 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 MUC21A0A140T8X8 626 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 SCO1O75880 301 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 CRYGDP07320 174 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 MIFP14174 115 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
SF3A1-207ENST00000471342 LYZL1Q6UWQ5 148 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 FAM159AQ6UWV7 190 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 Q6ZTI0 123 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 GATD1Q8NB37 220 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 C18orf15Q96N68 181 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 SPATA25Q9BR10 227 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 GFRA4Q9GZZ7 299 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 Q9UF83 564 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 NAGKQ9UJ70 344 aa7□□□□□ -1.29
SF3A1-207ENST00000471342 CBY3A6NI87 242 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 HIGD1CA8MV81 97 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 H3BVH4 76 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 RHEBQ15382 184 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 C12orf74Q32Q52 190 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 ZNF493Q6ZR52 646 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 SVBPQ8N300 66 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 ANAPC16Q96DE5 110 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 KCNS1Q96KK3 526 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 NOP10Q9NPE3 64 aaKnown RBP6.99□□□□□ -1.29
SF3A1-207ENST00000471342 BIN3Q9NQY0 253 aa6.99□□□□□ -1.29
SF3A1-207ENST00000471342 TRGV11A0A075B6L2 103 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 A0A0J9YWU9 116 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 A8MWL6 223 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 PHOX2AO14813 284 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 HTN1P15515 57 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 CBLN2Q8IUK8 224 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 C16orf74Q96GX8 76 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 IMMP2LQ96T52 175 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 CTDSP1Q9GZU7 261 aa6.98□□□□□ -1.29
SF3A1-207ENST00000471342 MRPL16Q9NX20 251 aaKnown RBP6.98□□□□□ -1.29
SF3A1-207ENST00000471342 RS1O15537 224 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 MT-ND4LP03901 98 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 NHLRC4P0CG21 123 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-207ENST00000471342 ASIPP42127 132 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 RPS20P60866 119 aaKnown RBP6.97□□□□□ -1.29
SF3A1-207ENST00000471342 ELOBQ15370 118 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 PIK3CD-AS1Q5SR53 167 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 FER1L6-AS1Q8NA97 138 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 PGLYRP4Q96LB8 373 aa6.97□□□□□ -1.29
SF3A1-207ENST00000471342 HYDINQ4G0P3 5121 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 COLCA2A8K830 154 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 M0R2P5 195 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 PPP1R2P9O14990 202 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 SNAPINO95295 136 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 HOXA5P20719 270 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 NTF3P20783 257 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 FHL2Q14192 279 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 LGALS9BQ3B8N2 356 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 CFAP126Q5VTH2 177 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 C15orf54Q8N8G6 183 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 DAZAP1Q96EP5 407 aaKnown RBP6.96□□□□□ -1.3
SF3A1-207ENST00000471342 ZNF479Q96JC4 524 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 SPXQ9BT56 116 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 RPS10P5Q9NQ39 176 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 TIMM8BQ9Y5J9 83 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-207ENST00000471342 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
SF3A1-207ENST00000471342 A0A1W2PPQ1 181 aa6.95□□□□□ -1.3
SF3A1-207ENST00000471342 EVI2AP22794 236 aa6.95□□□□□ -1.3
SF3A1-207ENST00000471342 ZNF415Q09FC8 603 aa6.95□□□□□ -1.3
SF3A1-207ENST00000471342 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
SF3A1-207ENST00000471342 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
SF3A1-207ENST00000471342 NACAE9PAV3 2078 aa6.95□□□□□ -1.3
SF3A1-207ENST00000471342 TGP01266 2768 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 TRBV24-1A0A075B6N3 115 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 TGIF2-C20orf24A0A0A6YYL0 155 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 CXorf65A6NEN9 183 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 LYRM9A8MSI8 78 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 F2Z2F3 143 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 EMP1P54849 157 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 TMEM136Q6ZRR5 245 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 VSIG2Q96IQ7 327 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 LYSTQ99698 3801 aa6.94□□□□□ -1.3
SF3A1-207ENST00000471342 RYR2Q92736 4967 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 GAGE12BA1L429 117 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 GAGE7O76087 117 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 GAGE12FP0CL80 117 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 GAGE12GP0CL81 117 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 GAGE12IP0CL82 117 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 LINC00694P0DN24 101 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 S100A1P23297 94 aa6.93□□□□□ -1.3
SF3A1-207ENST00000471342 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms