RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CLLU1Q5K131 121 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 FAM74A1Q5RGS3 127 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 C1orf194Q5T5A4 169 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 FAM78BQ5VT40 261 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 PATE2Q6UY27 113 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 LINC00305Q7Z4B0 112 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 NDUFA11Q86Y39 141 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 OR11H1Q8NG94 326 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 FAM213BQ8TBF2 198 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 SFT2D1Q8WV19 159 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 TMEM158Q8WZ71 300 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 NARS2Q96I59 477 aaKnown RBP3.24□□□□□ -1.89
CCDC39-202ENST00000471307 METTL26Q96S19 204 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 PBDC1Q9BVG4 233 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 MRPL32Q9BYC8 188 aaKnown RBP3.24□□□□□ -1.89
CCDC39-202ENST00000471307 VSIRQ9H7M9 311 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 RABAC1Q9UI14 185 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 FUT9Q9Y231 359 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 HIGD1AQ9Y241 93 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 UFC1Q9Y3C8 167 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 CBY1Q9Y3M2 126 aa3.24□□□□□ -1.89
CCDC39-202ENST00000471307 TENM1Q9UKZ4 2725 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 TMEM213A2RRL7 107 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 MAP1LC3B2A6NCE7 125 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 ZNF98A6NK75 572 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 COL6A5A8TX70 2615 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 SNAI2O43623 268 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 CXorf1O96002 111 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 CD5P06127 495 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 NMBP08949 121 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 MYCNOSP40205 109 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 PSMB3P49720 205 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 NDUFA5Q16718 116 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 KHDC3LQ587J8 217 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 LCN12Q6JVE5 192 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 BPIFA4PQ86YQ2 179 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 GPR82Q96P67 336 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 SHANK2-AS3Q9BTD1 123 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 MAP1LC3BQ9GZQ8 125 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 DAZ1Q9NQZ3 744 aaKnown RBP3.23□□□□□ -1.89
CCDC39-202ENST00000471307 TMEM167BQ9NRX6 74 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 MED9Q9NWA0 146 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 TMEM14CQ9P0S9 112 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 DOK5Q9P104 306 aa3.23□□□□□ -1.89
CCDC39-202ENST00000471307 FBN1P35555 2871 aaKnown RBP3.22□□□□□ -1.89
CCDC39-202ENST00000471307 IGKV2-28A0A075B6P5 120 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 IGHV7-4-1A0A0J9YVY3 117 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 LINC00862A6NCI5 91 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 A8MWP6 167 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 H3BRN7 92 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 OR7C2O60412 319 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 IFNA1P01562 189 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 IGKV2D-28P01615 120 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 HIST1H1EP10412 219 aaKnown RBP3.22□□□□□ -1.89
CCDC39-202ENST00000471307 RPL7P18124 248 aaKnown RBP3.22□□□□□ -1.89
CCDC39-202ENST00000471307 GCHFRP30047 84 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 PFN2P35080 140 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 SYNJ2BPP57105 145 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 RPL18AQ02543 176 aaKnown RBP3.22□□□□□ -1.89
CCDC39-202ENST00000471307 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 GUK1Q16774 197 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 SPATA31B1PQ5VZV4 182 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 LCN15Q6UWW0 184 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 UNQ9165/PRO28630Q6UXU0 137 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 MIR17HGQ75NE6 70 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 OR8I2Q8N0Y5 310 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 ZNF738Q8NE65 137 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 FAM167A-AS1Q96KT0 104 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 TXNDC17Q9BRA2 123 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 SLC25A2Q9BXI2 301 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 NKX6-2Q9C056 277 aaPredicted RBP3.22□□□□□ -1.89
CCDC39-202ENST00000471307 SMDT1Q9H4I9 107 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 SMPXQ9UHP9 88 aa3.22□□□□□ -1.89
CCDC39-202ENST00000471307 STAB1Q9NY15 2570 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 IGHV3OR16-8A0A075B7F1 116 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 TRAV5A0A0B4J249 113 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 A0A1W2PRE2 83 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 RBFOX3A6NFN3 312 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 C2orf70A6NJV1 201 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 OVOL1O14753 267 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 HMGB3O15347 200 aaKnown RBP3.21□□□□□ -1.9
CCDC39-202ENST00000471307 ZNF207O43670 478 aaKnown RBP3.21□□□□□ -1.9
CCDC39-202ENST00000471307 NDUFS6O75380 124 aaKnown RBP3.21□□□□□ -1.9
CCDC39-202ENST00000471307 OR5AL1P0C617 328 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 NBEAP1P0C6P0 100 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 ARL14EPLP0DKL9 152 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 CBLN1P23435 193 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 GALR1P47211 349 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 FGF8P55075 233 aaPredicted RBP3.21□□□□□ -1.9
CCDC39-202ENST00000471307 CCL20P78556 96 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 PDE6HQ13956 83 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 DEFB136Q30KP8 78 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 SAMD13Q5VXD3 122 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 TEX43Q6ZNM6 134 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 LYPD1Q8N2G4 141 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 EIF4E3Q8N5X7 224 aaKnown RBP3.21□□□□□ -1.9
CCDC39-202ENST00000471307 C3orf56Q8N813 242 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 FXYD5Q96DB9 178 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 FAM210AQ96ND0 272 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 RHPN1-AS1Q9BWJ2 59 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms